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L3_108_039G1_scaffold_44

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Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_039G1_scaffold_44_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

738..1304
DNA (567bp) protein (189aa)
HAD-superfamily hydrolase, subfamily IA n=997 Tax=Enterobacteriaceae RepID=A7ZQC3_ECO24
yqaB; Putative phosphatase YqaB
Phosphatase YqaB {ECO:0000313|EMBL:ELI23234.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_108_039G1_scaffold_44_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1301..1729
DNA (429bp) protein (143aa)
Uncharacterized protein n=85 Tax=Escherichia RepID=B7MKG3_ECO45
yqaA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE08507.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_108_039G1_scaffold_44_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1802..3358
DNA (1557bp) protein (519aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
gshA; gamma-glutamate-cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase n=578 Tax=Enterobacteriaceae RepID=GSH1_ECO45
L3_108_039G1_scaffold_44_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3509..4024
DNA (516bp) protein (172aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
S-ribosylhomocysteine lyase n=546 Tax=Enterobacteriaceae RepID=LUXS_ECO24
S-ribosylhomocysteinase
L3_108_039G1_scaffold_44_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4075..5187)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=71 Tax=Escherichia RepID=E1S206_ECOUM
hypothetical protein
Putative RNA related enzyme {ECO:0000313|EMBL:CKH09558.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..5891)
DNA (708bp) protein (236aa)
Uncharacterized protein n=79 Tax=Escherichia RepID=B7MKF9_ECO45
hypothetical protein
2'-5' RNA ligase {ECO:0000313|EMBL:CKH09535.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5944..6111
DNA (168bp) protein (56aa)
Uncharacterized protein n=69 Tax=Escherichia coli RepID=T2MU82_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH09508.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6149..7687)
DNA (1539bp) protein (513aa)
Multidrug resistance protein B n=228 Tax=Escherichia RepID=E2QQE0_ECOLX
multidrug resistance protein B
H+ antiporter-1 family protein {ECO:0000313|EMBL:EHU53632.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_108_039G1_scaffold_44_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..8876)
DNA (1173bp) protein (391aa)
Multidrug resistance protein A n=758 Tax=Enterobacteriaceae RepID=E2QQD9_ECOLX
emrA; multidrug efflux system
Multidrug efflux system protein EmrA {ECO:0000313|EMBL:AFH12473.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_108_039G1_scaffold_44_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9003..9533)
DNA (531bp) protein (177aa)
Transcriptional repressor MprA n=1233 Tax=Enterobacteriaceae RepID=MPRA_ECO57
mprA; transcriptional repressor MprA
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ESA85898.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_108_039G1_scaffold_44_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9624..9959)
DNA (336bp) protein (112aa)
Uncharacterized protein n=86 Tax=Escherichia RepID=B7MKF5_ECO45
hypothetical protein
L-valine exporter {ECO:0000313|EMBL:AIX64528.1}; Putative inner membrane protein {ECO:0000313|EMBL:CKH09398.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9949..10686)
DNA (738bp) protein (246aa)
Inner membrane protein YgaZ n=230 Tax=Escherichia RepID=YGAZ_ECOLI
ygaZ; transporter
Inner membrane protein YgaZ {ECO:0000313|EMBL:KEO22733.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_108_039G1_scaffold_44_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10810..11994)
DNA (1185bp) protein (395aa)
Uncharacterized transporter ygaY n=108 Tax=Escherichia RepID=E2QQD5_ECOLX
ygaY; transporter ygaY
Major facilitator superfamily protein {ECO:0000313|EMBL:CKH09346.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12186..13178)
DNA (993bp) protein (331aa)
High-affinity glycine betaine-proline transport system protein n=156 Tax=Escherichia RepID=Q1R819_ECOUT
proX; glycine betaine transporter periplasmic subunit
Glycine betaine-binding periplasmic protein {ECO:0000313|EMBL:EQX25506.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_039G1_scaffold_44_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13236..14300)
DNA (1065bp) protein (355aa)
Glycine betaine/L-proline transport system permease protein P n=106 Tax=Escherichia RepID=A1AEM3_ECOK1
proW; glycine betaine transporter membrane protein
Glycine betaine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CAR04191.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_108_039G1_scaffold_44_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14293..15495)
DNA (1203bp) protein (401aa)
Glycine betaine/L-proline transport ATP-binding protein n=390 Tax=Escherichia coli RepID=E2QQD2_ECOLX
proV; glycine betaine transporter ATP-binding subunit
Glycine betaine/L-proline transport ATP-binding protein ProV {ECO:0000313|EMBL:EQX86812.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_108_039G1_scaffold_44_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15851..16810)
DNA (960bp) protein (320aa)
nrdF; ribonucleoside-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355, ECO:0000313|EMBL:CAR04189.1};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Ribonucleoside-diphosphate reductase subunit beta n=80 Tax=Escherichia RepID=A1AEM1_ECOK1
L3_108_039G1_scaffold_44_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16820..18964)
DNA (2145bp) protein (715aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Ribonucleoside-diphosphate reductase n=92 Tax=Escherichia RepID=B7MKE8_ECO45
L3_108_039G1_scaffold_44_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18937..19347)
DNA (411bp) protein (137aa)
Protein NrdI n=124 Tax=Escherichia RepID=NRDI_ECO45
nrdI; nrdI protein
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19344..19589)
DNA (246bp) protein (82aa)
Glutaredoxin n=20 Tax=Escherichia RepID=C1HJC1_9ESCH
nrdH; glutaredoxin-like protein NrdH
Glutaredoxin-like protein nrdH {ECO:0000313|EMBL:EHU20690.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_108_039G1_scaffold_44_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19798..20229)
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
Carboxymuconolactone decarboxylase family protein n=401 Tax=Escherichia RepID=B1LPE7_ECOSM
hypothetical protein
L3_108_039G1_scaffold_44_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20317..21651
DNA (1335bp) protein (445aa)
Transcriptional regulator, GntR family n=163 Tax=Escherichia RepID=B1LPE6_ECOSM
gabR; HTH-type transcriptional regulatory protein gabR
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AIX64517.1}; GntR family transcriptional regulator {ECO:0000313|EMBL:CKH09098.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_039G1_scaffold_44_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21708..22037)
DNA (330bp) protein (110aa)
Uncharacterized protein YgaM n=1302 Tax=Enterobacteriaceae RepID=YGAM_ECO57
ygaM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV64083.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_108_039G1_scaffold_44_24
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22189..22533
DNA (345bp) protein (115aa)
Uncharacterized protein YgaC n=1289 Tax=Enterobacteriaceae RepID=YGAC_ECO57
hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EIQ34316.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
L3_108_039G1_scaffold_44_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22570..23019)
DNA (450bp) protein (150aa)
L-alanine exporter AlaE n=219 Tax=Escherichia RepID=A1AEL4_ECOK1
ygaW; hypothetical protein
L-alanine exporter AlaE {ECO:0000256|HAMAP-Rule:MF_00914}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
L3_108_039G1_scaffold_44_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23687..24091
DNA (405bp) protein (135aa)
DNA-binding protein StpA n=79 Tax=Escherichia RepID=A1AEL3_ECOK1
stpA; DNA binding protein
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_039G1_scaffold_44_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24138..24662)
DNA (525bp) protein (175aa)
Predicted inner membrane protein with hydrolase activity n=174 Tax=Escherichia RepID=A1AEL2_ECOK1
ygaP; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR04179.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_108_039G1_scaffold_44_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24672..24971)
DNA (300bp) protein (100aa)
Probable HTH-type transcriptional regulator YgaV n=848 Tax=Enterobacteriaceae RepID=YGAV_ECOLI
ArsR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ELE53886.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_108_039G1_scaffold_44_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25154..25312
DNA (159bp) protein (53aa)
UPF0057 membrane protein YqaE n=1411 Tax=Enterobacteriaceae RepID=YQAE_ECO57
yqaE; hypothetical protein
Proteolipid membrane potential modulator family protein {ECO:0000313|EMBL:EMW17925.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L3_108_039G1_scaffold_44_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25396..25845
DNA (450bp) protein (150aa)
Uncharacterized protein YgaU n=633 Tax=Enterobacteriaceae RepID=YGAU_ECOL6
ygaU; LysM domain/BON superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:KDY66934.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Displaying items 1-30 of 111 in total

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