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L3_108_054G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 769 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_0_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33..176
DNA (144bp) protein (48aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0M3_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83065.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

281..505
DNA (225bp) protein (75aa)
N-acetyltransferase GCN5 n=1 Tax=Clostridium intestinale URNW RepID=U2NMK6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82526.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

566..1105
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Clostridium botulinum RepID=A5I0C7_CLOBH
grpB family protein
GrpB family protein {ECO:0000313|EMBL:AIY84306.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1233..1628)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030E013E
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AIY82506.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1793..2188)
DNA (396bp) protein (132aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83931.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2380..2898)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWH8_9CLOT
shikimate kinase family protein
Shikimate kinase family protein {ECO:0000313|EMBL:AIY84729.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3020..4576)
DNA (1557bp) protein (519aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSL5_9CLOT
diguanylate cyclase domain protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:AIY83959.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4701..5156)
DNA (456bp) protein (152aa)
RNA-binding region-containing protein (RNP-1) n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1P7_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82291.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5295..6011)
DNA (717bp) protein (239aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627, ECO:0000313|EMBL:AIY83160.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium colicanis 209318 RepID=N9Y155_9CLOT
L3_108_054G1_scaffold_0_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6128..7603)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEU9_9CLOT
amino acid permease family protein
Amino acid permease family protein {ECO:0000313|EMBL:AIY82945.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7957..9693)
DNA (1737bp) protein (579aa)
Sensory box/ggdef domain/hd domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2C4_CLOPF
diguanylate cyclase domain protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:AIY83086.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9814..10470)
DNA (657bp) protein (219aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:AIY83399.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHG8_9CLOT
L3_108_054G1_scaffold_0_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10546..11325)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STM5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84138.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11392..12198)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XPD1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83956.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12305..13156)
DNA (852bp) protein (284aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y149_9CLOT
EDD, DegV family domain protein
EDD, DegV family domain protein {ECO:0000313|EMBL:AIY82958.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13319..14461)
DNA (1143bp) protein (381aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84589.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14488..15789)
DNA (1302bp) protein (434aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83925.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15765..16397)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NT30_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82700.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16351..17115)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289DE78
pilus assembly , PilO family protein
Pilus assembly, PilO family protein {ECO:0000313|EMBL:AIY83455.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17102..17752)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 225 str. F0581 RepID=U2V7F4_9FUSO
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:AIY82336.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17754..18806)
DNA (1053bp) protein (351aa)
Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289020C
type IV pilus assembly PilM, family protein
Type IV pilus assembly PilM, family protein {ECO:0000313|EMBL:AIY85124.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18819..19577)
DNA (759bp) protein (253aa)
Leader peptidase (Prepilin peptidase) / N-methyltransferase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSG8_9CLOT
type IV leader peptidase family protein
Type IV leader peptidase family protein {ECO:0000313|EMBL:AIY83766.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19570..20010)
DNA (441bp) protein (147aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPE5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84396.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20089..20529)
DNA (441bp) protein (147aa)
Pilin n=1 Tax=Clostridium intestinale URNW RepID=U2NA21_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84279.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20590..21795)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCM6_9CLOT
type II secretion system (T2SS), F family protein
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:AIY83211.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21810..23522)
DNA (1713bp) protein (571aa)
Type IV fimbrial assembly protein PilB n=1 Tax=Clostridium intestinale URNW RepID=U2Q0G6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83499.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23681..24550)
DNA (870bp) protein (290aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:AIY84837.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Methionine aminopeptidase n=1 Tax=Clostridium colicanis 209318 RepID=N9WEU3_9CLOT
L3_108_054G1_scaffold_0_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24837..24983)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WFA8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83962.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25232..25915
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Listeria fleischmannii LU2006-1 RepID=M3J3T0_9LIST
hlyD secretion family protein
HlyD secretion family protein {ECO:0000313|EMBL:AIY83233.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_0_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25943..26629
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002F99398
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY82439.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 769 in total

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