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L3_108_054G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 385 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_5_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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533..1279
DNA (747bp) protein (249aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WL59_9CLOT
PPIC-type PPIASE domain protein
L3_108_054G1_scaffold_5_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1331..1996)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDX8_CLOBU
HAD hydrolase, IA, variant 1 family protein
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:AIY83763.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2071..3417)
DNA (1347bp) protein (449aa)
Iron only hydrogenase large subunit, C-terminal domain protein n=1 Tax=Clostridium intestinale URNW RepID=U2PRR3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82588.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3519..3632
DNA (114bp) protein (38aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY84714.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3865..5010
DNA (1146bp) protein (382aa)
Alcohol dehydrogenase, iron-containing n=2 Tax=Clostridium botulinum RepID=C1FQD3_CLOBJ
iron-containing alcohol dehydrogenase family protein
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:AIY84530.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5208..6032
DNA (825bp) protein (275aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNN9_9CLOT
merR regulatory family protein
MerR regulatory family protein {ECO:0000313|EMBL:AIY84372.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6413..7531
DNA (1119bp) protein (373aa)
membrane protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028867D6
multidrug resistance efflux transporter family protein
Multidrug resistance efflux transporter family protein {ECO:0000313|EMBL:AIY83092.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7537..7803
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289A6FB
Uncharacterized protein {ECO:0000313|EMBL:KJU72338.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_108_054G1_scaffold_5_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7825..8121
DNA (297bp) protein (99aa)
Bacterial microcompartments family protein n=10 Tax=Clostridium RepID=A5I3P2_CLOBH
BMC domain protein
BMC domain protein {ECO:0000313|EMBL:AIY83568.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8138..8437
DNA (300bp) protein (100aa)
Propanediol utilization protein n=1 Tax=Clostridium botulinum B str. Eklund 17B(NRP) RepID=U4P4R5_CLOBO
BMC domain protein
BMC domain protein {ECO:0000313|EMBL:AIY84986.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8465..9952
DNA (1488bp) protein (496aa)
Aldehyde-alcohol dehydrogenase 2 n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZM3_CLOBA
aldehyde dehydrogenase family protein
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AIY82542.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9972..12518
DNA (2547bp) protein (849aa)
Formate C-acetyltransferase n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8CEB4_CLOBO
Glycyl radical enzyme, PFL2/glycerol dehydratase family protein {ECO:0000313|EMBL:AIY83228.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
glycyl radical enzyme, PFL2/glycerol dehydratase family protein
L3_108_054G1_scaffold_5_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12584..13537
DNA (954bp) protein (318aa)
Glycyl-radical enzyme activating family protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A3S6_CLOBO
glycyl-radical enzyme activating family protein
Glycyl-radical enzyme activating family protein {ECO:0000313|EMBL:AIY82781.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13539..13922
DNA (384bp) protein (128aa)
Ethanolamine utilization protein EutS n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6X7_9CLOT
pduU; propanediol utilization protein PduU
Propanediol utilization protein PduU {ECO:0000313|EMBL:AIY83791.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13922..14338
DNA (417bp) protein (139aa)
EutP/PduV family GTP-binding protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNQ0_9CLOT
ethanolamine utilization - propanediol utilization family protein
Ethanolamine utilization-propanediol utilization family protein {ECO:0000313|EMBL:AIY84228.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14353..14967
DNA (615bp) protein (205aa)
ATP:Cob(I)alamin adenosyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287A53C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82631.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14972..15817
DNA (846bp) protein (282aa)
Ethanolamine utilization protein EutJ family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNQ2_9CLOT
eutJ; ethanolamine utilization protein EutJ
Ethanolamine utilization protein EutJ {ECO:0000313|EMBL:AIY83541.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15833..16138
DNA (306bp) protein (102aa)
Microcompartments protein n=2 Tax=Clostridium botulinum B RepID=B2TJS0_CLOBB
BMC domain protein
BMC domain protein {ECO:0000313|EMBL:AIY84952.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16132..16398
DNA (267bp) protein (89aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNQ4_9CLOT
ethanolamine utilization EutN/carboxysome family protein
Ethanolamine utilization EutN/carboxysome family protein {ECO:0000313|EMBL:AIY84289.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16523..17197
DNA (675bp) protein (225aa)
Cupin domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNQ7_9CLOT
cupin domain protein
Cupin domain protein {ECO:0000313|EMBL:AIY83321.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17221..17871
DNA (651bp) protein (217aa)
Carbon dioxide concentrating mechanism proteinccmK-like protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EVG6_CLOTA
BMC domain protein
BMC domain protein {ECO:0000313|EMBL:AIY82898.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17898..19493
DNA (1596bp) protein (532aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:AIY82406.1}; EC=1.2.1.10 {ECO:0000313|EMBL:AIY82406.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Acetaldehyde dehydrogenase (Acetylating) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNQ9_9CLOT
L3_108_054G1_scaffold_5_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19519..20178
DNA (660bp) protein (220aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Phosphate propanoyltransferase n=2 Tax=Clostridium tetani RepID=Q894U4_CLOTE
propanediol utilization PduL family protein
L3_108_054G1_scaffold_5_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20245..20532
DNA (288bp) protein (96aa)
Bacterial microcompartments family protein n=19 Tax=Clostridium RepID=A5I3M7_CLOBH
BMC domain protein
Carboxysome structural protein EutM {ECO:0000313|EMBL:KJU72324.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_5_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21250..22551
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XV69_9CLOT
nlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:AIY85151.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22687..23457
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y5Z0_9CLOT
methyltransferase small domain protein
Methyltransferase small domain protein {ECO:0000313|EMBL:AIY83852.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23450..24295
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium colicanis 209318 RepID=N9WL64_9CLOT
tetrapyrrole (Corrin/Porphyrin) Methylases family protein
L3_108_054G1_scaffold_5_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24406..24645)
DNA (240bp) protein (80aa)
Transition state regulatory protein AbrB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H572_9CLOT
transcriptional regulator, AbrB family domain protein
AbrB family transcriptional regulator {ECO:0000313|EMBL:KJU72320.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_5_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25233..25823
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y757_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84286.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_5_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25896..26042
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU65_9CLOT
yvrJ family protein
YvrJ family protein {ECO:0000313|EMBL:AIY82903.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 385 in total

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