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L3_108_054G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 233 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_11_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)
rbr3A; reverse rubrerythrin-1 (EC:1.11.1.1)
Reverse rubrerythrin-1 {ECO:0000313|EMBL:AIY84692.1}; EC=1.11.1.1 {ECO:0000313|EMBL:AIY84692.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative Rubredoxin/rubrerythrin n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7R9_9CLOT
L3_108_054G1_scaffold_11_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(453..1955)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002882497
hypothetical protein
UPF0371 protein U729_184 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2079..2249)
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CSX0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83573.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2326..3000)
DNA (675bp) protein (225aa)
Transcriptional regulatory protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HAZ1_ILYPC
response regulator
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_11_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3004..4542)
DNA (1539bp) protein (513aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNB3_CLOPF
sensory box protein
L3_108_054G1_scaffold_11_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4683..5681)
DNA (999bp) protein (333aa)
Putative D-lactate dehydrogenase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNM9_CLOPF
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein
Lactate dehydrogenase {ECO:0000313|EMBL:KJU71051.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_11_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5713..6780)
DNA (1068bp) protein (356aa)
Putative Transporter, auxin efflux carrier family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN15_9CLOT
membrane transport family protein
Malate permease {ECO:0000313|EMBL:KJU71052.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_11_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6993..7691)
DNA (699bp) protein (233aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83895.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7707..8414)
DNA (708bp) protein (236aa)
PHP domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2Q8_CLOBI
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:AIY83387.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8505..9863)
DNA (1359bp) protein (453aa)
Putative Mate efflux family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F0X1_9CLOT
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AIY84064.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9905..11080)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNL5_CLOPF
aminotransferase class-V family protein
Aminotransferase class-V family protein {ECO:0000313|EMBL:AIY82572.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11074..11559)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7C8_9CLOT
asnC family protein
AsnC family protein {ECO:0000313|EMBL:AIY85061.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11845..12615
DNA (771bp) protein (257aa)
HisJ family histidinol phosphate phosphatase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3G7_9CLOT
histidinol phosphate phosphatase, HisJ family protein
Histidinol phosphate phosphatase, HisJ family protein {ECO:0000313|EMBL:AIY84224.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12670..13983)
DNA (1314bp) protein (438aa)
Transporter n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPQ4_9CLOT
neurotransmitter symporter family protein
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14390..15028)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Colletotrichum gloeosporioides (strain Nara gc5) RepID=L2FWF7_COLGN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82352.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15122..16543)
DNA (1422bp) protein (474aa)
Putative Arginine/lysine/ornithine decarboxylase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FM27_9CLOT
beta-eliminating lyase family protein
Beta-eliminating lyase family protein {ECO:0000313|EMBL:AIY83220.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16666..17874)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDI3_9CLOT
peptidase M16 inactive domain protein
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:AIY83359.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17881..19236)
DNA (1356bp) protein (452aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q470_9CLOT
radical SAM additional 4Fe4S-binding SPASM domain protein
Radical SAM additional 4Fe4S-binding SPASM domain protein {ECO:0000313|EMBL:AIY82342.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19305..19442)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZA5_9CLOT
hypothetical protein
Fe-S protein {ECO:0000313|EMBL:KJU71064.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_11_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19538..20569)
DNA (1032bp) protein (344aa)
fni; isopentenyl-diphosphate delta-isomerase, type 2 (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354, ECO:0000313|EMBL:AIY82854.1};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQJ1_CLOPA
L3_108_054G1_scaffold_11_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20708..22039)
DNA (1332bp) protein (444aa)
nox; NADH oxidase (EC:1.6.99.3)
NADH oxidase {ECO:0000313|EMBL:AIY83647.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AIY83647.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NADH oxidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QA62_9CLOT
L3_108_054G1_scaffold_11_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22410..23792
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XRQ7_9CLOT
TPR repeat family protein
TPR repeat family protein {ECO:0000313|EMBL:AIY84285.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23834..24844)
DNA (1011bp) protein (337aa)
Polysaccharide deacetylase family protein n=2 Tax=Clostridium perfringens RepID=B1BGB8_CLOPF
polysaccharide deacetylase family protein
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AIY82533.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25149..26012
DNA (864bp) protein (288aa)
fba; fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:AIY82255.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AIY82255.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium sp. CAG:265 RepID=R6L1C4_9CLOT
L3_108_054G1_scaffold_11_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26116..27279)
DNA (1164bp) protein (388aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYR1_CLOBO
Membrane protein {ECO:0000313|EMBL:KJU71069.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_108_054G1_scaffold_11_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27329..27739)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MWB2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83384.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27858..29507)
DNA (1650bp) protein (550aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVQ6_9CLOT
Miro-like family protein {ECO:0000313|EMBL:AIY83808.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
miro-like family protein
L3_108_054G1_scaffold_11_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29598..30737)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZC1_9CLOT
ABC-2 type transporter family protein
ABC-2 type transporter family protein {ECO:0000313|EMBL:AIY83282.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30713..31852)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEI8_9CLOT
ABC-2 type transporter family protein
ABC-2 type transporter family protein {ECO:0000313|EMBL:AIY85081.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_11_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31867..32802)
DNA (936bp) protein (312aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA49_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84831.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 233 in total

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