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L3_108_054G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_13_1
unknown

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1..570
DNA (570bp) protein (190aa)

This feature has no annotations

L3_108_054G1_scaffold_13_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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524..1930
DNA (1407bp) protein (469aa)
Collagen adhesion protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLM8_CLOPF
Collagen adhesion protein {ECO:0000313|EMBL:EDS79290.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_108_054G1_scaffold_13_3
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2144..3532)
DNA (1389bp) protein (463aa)
SpoIID/LytB domain protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTP6_FILAD
SpoIID/LytB domain-containing protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:EFE27853.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_108_054G1_scaffold_13_4
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3541..4593)
DNA (1053bp) protein (351aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J4W8J5_9FIRM
L3_108_054G1_scaffold_13_5
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4610..5215)
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XDL8_9FIRM
L3_108_054G1_scaffold_13_6
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5230..5721)
DNA (492bp) protein (164aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=4 Tax=unclassified Eubacteriaceae RepID=G9X0X0_9FIRM
L3_108_054G1_scaffold_13_7
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5718..6815)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X0X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14945.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
hisC; aminotransferase
L3_108_054G1_scaffold_13_8
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6802..7377)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=2 Tax=unclassified Eubacteriaceae RepID=G9X0X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14949.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
SAM-dependent methyltransferase
L3_108_054G1_scaffold_13_9
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7443..11045)
DNA (3603bp) protein (1201aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
rpoC; DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (Transcriptase subunit beta') (RNA polymerase subunit beta') (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J4W8S1_9FIRM
L3_108_054G1_scaffold_13_10
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..14796)
DNA (3711bp) protein (1237aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
rpoB; DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (Transcriptase subunit beta) (RNA polymerase subunit beta) (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HU70_9FIRM
L3_108_054G1_scaffold_13_11
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14990..15316)
DNA (327bp) protein (109aa)
BFD domain protein (2Fe-2S)-binding domain protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AP45_SEBTE
BFD (2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KHS55818.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
L3_108_054G1_scaffold_13_12
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15670..16326)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M3Z4_CAPGI
Uncharacterized protein {ECO:0000313|EMBL:KGN78962.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
L3_108_054G1_scaffold_13_13
unknown

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comp(16506..16709)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_108_054G1_scaffold_13_14
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16906..17175
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YW00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28774.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L3_108_054G1_scaffold_13_15
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17337..17798)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E3X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFM64424.1}; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus stomatis DSM 17678.;"
hypothetical protein
L3_108_054G1_scaffold_13_16
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18016..18570)
DNA (555bp) protein (185aa)
Putative lipoprotein n=1 Tax=Eubacterium sp. AS15 RepID=J5GHF2_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EJP18463.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
hypothetical protein
L3_108_054G1_scaffold_13_17
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18926..20869)
DNA (1944bp) protein (648aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
lysS; Lysine-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XFQ4_9FIRM
L3_108_054G1_scaffold_13_18
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20879..21361)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=3 Tax=unclassified Eubacteriaceae RepID=G9XFQ3_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
greA; transcription elongation factor
L3_108_054G1_scaffold_13_19
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21407..22396)
DNA (990bp) protein (330aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
tRNA-dihydrouridine synthase n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XFQ2_9FIRM
putative TIM-barrel protein, , NifR3 family
L3_108_054G1_scaffold_13_20
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22377..23153)
DNA (777bp) protein (259aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
Type III pantothenate kinase n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5UIW6_9FIRM
pantothenate kinase
L3_108_054G1_scaffold_13_21
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23169..24320)
DNA (1152bp) protein (384aa)
putative Phosphoserine phosphatase (EC:3.1.3.3)
Putative Phosphoserine phosphatase {ECO:0000313|EMBL:CBH21007.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CBH21007.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Putative Phosphoserine phosphatase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX42_CLOSD
L3_108_054G1_scaffold_13_22
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(24352..25245)
DNA (894bp) protein (298aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V698_THELD
PAS/PAC sensor-containing diguanylate cyclase
Tax=BJP_IG2069_Spirochaetales_48_31
L3_108_054G1_scaffold_13_23
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25263..26741)
DNA (1479bp) protein (493aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Glutamate--tRNA ligase n=1 Tax=Eubacterium sp. AS15 RepID=J4UGV7_9FIRM
glutamate--tRNA ligase
L3_108_054G1_scaffold_13_24
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26847..27623)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=2 Tax=unclassified Eubacteriaceae RepID=G9WZH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15792.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
L3_108_054G1_scaffold_13_25
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27647..28618)
DNA (972bp) protein (324aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HQF5_9FIRM
L3_108_054G1_scaffold_13_26
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28650..30914)
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HKT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL17687.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
penicillin-binding protein 2B
L3_108_054G1_scaffold_13_27
unknown

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comp(30927..31451)
DNA (525bp) protein (175aa)

This feature has no annotations

L3_108_054G1_scaffold_13_28
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31503..32444)
DNA (942bp) protein (314aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Eubacterium sp. AS15 RepID=J5GK42_9FIRM
mraW; S-adenosyl-methyltransferase MraW
L3_108_054G1_scaffold_13_29
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32422..33168)
DNA (747bp) protein (249aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5W7W6_9FIRM
lgt; prolipoprotein diacylglyceryl transferase
L3_108_054G1_scaffold_13_30
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33571..33936
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HQ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL17034.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
GntR family transcriptional regulator
Displaying items 1-30 of 242 in total

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