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L3_108_054G1_scaffold_17

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Displaying items 1-30 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_17_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..95
DNA (93bp) protein (31aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase n=1 Tax=Escherichia coli ATCC 25922 RepID=R9EDW3_ECOLX
gadB; glutamate decarboxylase
L3_108_054G1_scaffold_17_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

463..1287
DNA (825bp) protein (275aa)
HTH-type transcriptional regulator GadX n=257 Tax=Escherichia RepID=GADX_ECOL6
gadX; transcriptional regulator GadX
HTH-type transcriptional regulator gadX {ECO:0000313|EMBL:ELJ67672.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_108_054G1_scaffold_17_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1656..2384
DNA (729bp) protein (243aa)
HTH-type transcriptional regulator GadW n=346 Tax=Escherichia RepID=GADW_ECOL6
transcriptional regulator YhiW
HTH-type transcriptional regulator gadW {ECO:0000313|EMBL:EQP45259.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_108_054G1_scaffold_17_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2529..2810
DNA (282bp) protein (94aa)
Uncharacterized protein n=437 Tax=Enterobacteriaceae RepID=E8YBZ2_ECOKO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN22919.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_108_054G1_scaffold_17_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2747..5860)
DNA (3114bp) protein (1038aa)
Multidrug resistance protein mdtF n=116 Tax=Escherichia RepID=E2QGM1_ECOLX
multidrug transporter, RpoS-dependent
Multidrug resistance protein MdtF {ECO:0000313|EMBL:EHU24372.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_108_054G1_scaffold_17_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5885..7042)
DNA (1158bp) protein (386aa)
Multidrug resistance protein MdtE n=363 Tax=Escherichia RepID=MDTE_ECOL6
yhiU; multidrug efflux system protein MdtE
Multidrug resistance protein mdtE {ECO:0000313|EMBL:EHU18780.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_108_054G1_scaffold_17_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7102..7431
DNA (330bp) protein (110aa)
Uncharacterized protein n=105 Tax=Escherichia coli RepID=T2MWK0_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG97239.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_054G1_scaffold_17_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7381..7908)
DNA (528bp) protein (176aa)
Transcriptional regulator GadE n=1330 Tax=Enterobacteriaceae RepID=GADE_ECO57
putative DNA-binding transcriptional activator
Transcriptional regulator GadE {ECO:0000313|EMBL:EGI08738.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_108_054G1_scaffold_17_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8707..9279)
DNA (573bp) protein (191aa)
Protein hdeD n=420 Tax=Escherichia RepID=E2QGL8_ECOLX
hdeD; acid-resistance membrane protein
Protein hdeD {ECO:0000313|EMBL:EQY81001.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_108_054G1_scaffold_17_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9534..9866
DNA (333bp) protein (111aa)
Acid stress chaperone HdeA n=417 Tax=Escherichia RepID=D3Y2Z3_ECOLX
hdeA; acid-resistance protein
Acid stress chaperone HdeA {ECO:0000256|HAMAP-Rule:MF_00946}; Flags: Precursor;; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_108_054G1_scaffold_17_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9970..10308
DNA (339bp) protein (113aa)
Acid stress chaperone HdeB n=21 Tax=Escherichia coli RepID=B1LJ51_ECOSM
acid-resistance protein
Acid stress chaperone HdeB {ECO:0000256|HAMAP-Rule:MF_00947}; Flags: Precursor;; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_108_054G1_scaffold_17_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10444..11019
DNA (576bp) protein (192aa)
Uncharacterized protein yhiD n=8 Tax=Escherichia coli RepID=E2QGL5_ECOLX
yhiD; Mg(2+) transport ATPase
Putative transport ATPase {ECO:0000313|EMBL:EGI48745.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_108_054G1_scaffold_17_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11071..11841)
DNA (771bp) protein (257aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
Hemin import ATP-binding protein HmuV n=1 Tax=Escherichia coli TA206 RepID=F4TZQ2_ECOLX
hmuV; hemin importer ATP-binding subunit
L3_108_054G1_scaffold_17_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11838..12794)
DNA (957bp) protein (319aa)
Permease of iron compound ABC transport system n=413 Tax=Escherichia RepID=E2QGL3_ECOLX
hemin ABC transporter permease component
Uncharacterized protein {ECO:0000313|EMBL:EOV61716.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L3_108_054G1_scaffold_17_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12879..13502)
DNA (624bp) protein (208aa)
Uncharacterized protein n=80 Tax=Escherichia RepID=B7MEK7_ECO45
chuY; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR05128.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_108_054G1_scaffold_17_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13502..13996)
DNA (495bp) protein (165aa)
Uncharacterized protein n=370 Tax=Escherichia RepID=B7MEK6_ECO45
chuX; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE52299.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_108_054G1_scaffold_17_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14009..15346)
DNA (1338bp) protein (446aa)
Putative oxygen independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ABE09463.1}; EC=1.3.3.3 {ECO:0000313|EMBL:ABE09463.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
HugW n=97 Tax=Escherichia RepID=D5D3L9_ECOKI
coproporphyrinogen III oxidase
L3_108_054G1_scaffold_17_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15366..16280)
DNA (915bp) protein (305aa)
Hemin-binding periplasmic protein hmuT n=173 Tax=Escherichia RepID=T2MXH9_ECOLX
chuT; periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:EOU87498.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_108_054G1_scaffold_17_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16963..18945
DNA (1983bp) protein (661aa)
Outer membrane haem/haemoglobin receptor n=77 Tax=Escherichia RepID=Q4A1H1_ECOLX
Outer membrane hemin receptor ChuA {ECO:0000313|EMBL:EQX25142.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
chuA; outer membrane hemin receptor
L3_108_054G1_scaffold_17_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18994..20022
DNA (1029bp) protein (343aa)
Heme oxygenase n=159 Tax=Escherichia RepID=B7MEK2_ECO45
chuS; heme/hemoglobin transport protein ChuS
Putative heme/hemoglobin transport protein {ECO:0000313|EMBL:EHU38058.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_108_054G1_scaffold_17_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20079..20609)
DNA (531bp) protein (177aa)
HTH-type transcriptional regulator DctR n=339 Tax=Escherichia RepID=DCTR_ECOL6
LuxR family transcriptional regulator
DNA-binding transcriptional regulator {ECO:0000313|EMBL:EHU38057.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_108_054G1_scaffold_17_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20762..21328)
DNA (567bp) protein (189aa)
Outer membrane protein slp n=1 Tax=Escherichia coli UMEA 3052-1 RepID=T8M3Y3_ECOLX
slp; outer membrane lipoprotein
Outer membrane protein slp {ECO:0000313|EMBL:EMX82470.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L3_108_054G1_scaffold_17_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21722..21895)
DNA (174bp) protein (58aa)
Uncharacterized protein n=207 Tax=Escherichia RepID=E1PJ02_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP45237.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_108_054G1_scaffold_17_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22512..22937)
DNA (426bp) protein (142aa)
arsC; arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Arsenate reductase ArsC n=226 Tax=Escherichia RepID=A1AH38_ECOK1
L3_108_054G1_scaffold_17_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23270..23443)
DNA (174bp) protein (58aa)
Uncharacterized protein n=194 Tax=Escherichia RepID=B7MEJ7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ73425.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_108_054G1_scaffold_17_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23608..24960)
DNA (1353bp) protein (451aa)
gor; glutathione-disulfide reductase (EC:1.8.1.7)
Glutathione oxidoreductase n=103 Tax=Escherichia RepID=B7MEJ5_ECO45
Glutathione reductase {ECO:0000313|EMBL:EQX25135.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_054G1_scaffold_17_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25032..25874)
DNA (843bp) protein (281aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Ribosomal RNA large subunit methyltransferase J n=799 Tax=Enterobacteriaceae RepID=J7QIA1_ECOLX
putative DNA processing protein
L3_108_054G1_scaffold_17_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26077..28119
DNA (2043bp) protein (681aa)
Oligopeptidase A {ECO:0000313|EMBL:EHU36137.1}; EC=3.4.24.70 {ECO:0000313|EMBL:EHU36137.1};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Oligopeptidase A n=160 Tax=Escherichia RepID=Q1R5B8_ECOUT
prlC; oligopeptidase A
L3_108_054G1_scaffold_17_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28127..28879
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000255|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000255|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01523}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Ribosomal RNA small subunit methyltransferase J n=189 Tax=Escherichia coli RepID=RSMJ_ECO45
hypothetical protein
L3_108_054G1_scaffold_17_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28928..30397)
DNA (1470bp) protein (490aa)
Dipeptide and tripeptide permease B n=337 Tax=Escherichia RepID=C3SNY2_ECOLX
yhiP; hypothetical protein
Dipeptide and tripeptide permease B {ECO:0000256|HAMAP-Rule:MF_01879}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Displaying items 1-30 of 197 in total

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