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L3_108_054G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_55_1
Fusobacterium periodonticum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(809..1030)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Fusobacterium periodonticum 1_1_41FAA RepID=D6LFA2_9FUSO
Putative uncharacterized protein {ECO:0000313|EMBL:EFG28837.2}; TaxID=469621 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodonticum 1_1_41FAA.;"
L3_108_054G1_scaffold_55_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1088..1219)
DNA (132bp) protein (44aa)
Toxin SymE, type I toxin-antitoxin system n=1 Tax=Mogibacterium sp. CM50 RepID=J5UB33_9FIRM
Endoribonuclease SymE {ECO:0000313|EMBL:CRH76674.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_108_054G1_scaffold_55_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1392..2507)
DNA (1116bp) protein (372aa)
Magnesium chelatase family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB82_9FIRM
Magnesium chelatase family protein {ECO:0000313|EMBL:CDE35472.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
magnesium chelatase family protein
L3_108_054G1_scaffold_55_4
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2684..3442)
DNA (759bp) protein (253aa)
Methyltransferase domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRH7_9CLOT
ubiE/COQ5 methyltransferase
Tax=BJP_IG2069_Clostridiales_42_11
L3_108_054G1_scaffold_55_5
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3482..3736)
DNA (255bp) protein (85aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AR29_EUBCE
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EIM56252.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
hypothetical protein
L3_108_054G1_scaffold_55_6
unknown

Not on your lists

comp(4260..5228)
DNA (969bp) protein (323aa)

This feature has no annotations

L3_108_054G1_scaffold_55_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5410..6147
DNA (738bp) protein (246aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. M62/1 RepID=D4CE48_9CLOT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_108_054G1_scaffold_55_8
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6148..7206
DNA (1059bp) protein (353aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
nucleotide sugar dehydratase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37F08
Dehydratase/epimerase {ECO:0000313|EMBL:CDF02975.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L3_108_054G1_scaffold_55_9
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7223..9022
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V7I3_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK46093.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_108_054G1_scaffold_55_10

Not on your lists

comp(9033..9890)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=M2P8T8_9FIRM
Uncultured bacterium extrachromosomal DNA RGI01642 {ECO:0000313|EMBL:CDL66581.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transposase, IS861
L3_108_054G1_scaffold_55_11
Lactobacillus iners, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10085..10486)
DNA (402bp) protein (134aa)
Transposase n=2 Tax=Lactobacillus iners RepID=E1NUK5_9LACO
Transposase {ECO:0000313|EMBL:EFO70268.1}; TaxID=879297 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus iners LactinV 01V1-a.;"
putative transposase
L3_108_054G1_scaffold_55_12
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10590..11600)
DNA (1011bp) protein (337aa)
Acyltransferase n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D8I3_9FIRM
Acyltransferase {ECO:0000313|EMBL:ESE29924.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
acyltransferase family domain
L3_108_054G1_scaffold_55_13
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

comp(11636..12475)
DNA (840bp) protein (280aa)
teichoic acid ABC transporter ATP-binding protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B56B8C
Teichoic-acid-transporting ATPase {ECO:0000313|EMBL:CCX65140.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L3_108_054G1_scaffold_55_14
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

comp(12487..13263)
DNA (777bp) protein (259aa)
ABC transporter n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B3B176
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_108_054G1_scaffold_55_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13428..16028)
DNA (2601bp) protein (867aa)
ATP-dependent Clp protease ATP-binding subunit ClpB n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z0Z4_EUBE2
ATP-dependent Clp protease ATP-binding subunit ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_108_054G1_scaffold_55_16
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16233..17441)
DNA (1209bp) protein (403aa)
Phage integrase family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A4T7_CLODI
Site-specific recombinase XerC
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03479.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
L3_108_054G1_scaffold_55_17
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18315..19829)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HVV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO15823.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
Relaxase/mobilization nuclease family protein
L3_108_054G1_scaffold_55_18
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19843..20169)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2Q1D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG91534.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
mobilization protein
L3_108_054G1_scaffold_55_19
unknown

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comp(20341..20613)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_108_054G1_scaffold_55_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20617..21381)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LTY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62259.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
sporulation initiation inhibitor protein Soj
L3_108_054G1_scaffold_55_21
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21645..21908)
DNA (264bp) protein (88aa)
Plasmid stabilization system protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D723_9FIRM
Plasmid stabilization system protein {ECO:0000313|EMBL:EGY76300.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
addiction module toxin, RelE/StbE family
L3_108_054G1_scaffold_55_22
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21905..22126)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D722_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGY76299.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
antitoxin
L3_108_054G1_scaffold_55_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22603..23271)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JJW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34251.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
resolvase
L3_108_054G1_scaffold_55_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23554..24243)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31879.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_108_054G1_scaffold_55_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24532..25527)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5W6_9CLOT
Domain of unknown function (DUF955).
Uncharacterized protein {ECO:0000313|EMBL:ENZ31096.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_108_054G1_scaffold_55_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25596..25871)
DNA (276bp) protein (92aa)
RelE/StbE family addiction module toxin n=2 Tax=Ruminococcus RepID=C6J9M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79179.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
addiction module toxin, RelE/StbE family
L3_108_054G1_scaffold_55_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25861..26127)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DV48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82804.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_108_054G1_scaffold_55_28
Eubacterium saphenum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26486..26743)
DNA (258bp) protein (86aa)
Prevent-host-death family protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0B4_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EEU03404.1}; TaxID=592031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium saphenum ATCC 49989.;"
hypothetical protein
L3_108_054G1_scaffold_55_29
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26846..32458)
DNA (5613bp) protein (1871aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW82_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EOS38440.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
LPXTG-motif cell wall anchor domain protein
L3_108_054G1_scaffold_55_30
Strongyloides ratti, Strongyloides, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(32535..33638)
DNA (1104bp) protein (368aa)
Titin, putative n=1 Tax=Pediculus humanus subsp. corporis RepID=E0VZZ8_PEDHC
Immunoglobulin subtype 2 domain and Immunoglobulin subtype domain and Fibronectin, type III domain and Immunoglobulin-like domain and Immunoglobulin I-set domain and Immunoglobulin-like fold domain... {ECO:0000313|EMBL:CEF63976.1}; TaxID=34506 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides.;" source="Strongyloides ratti (Parasitic roundworm).;"
beta-galactosidase
Displaying items 1-30 of 107 in total

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