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L3_108_054G1_scaffold_72

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_72_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(514..1170)
DNA (657bp) protein (219aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1RR14_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT70212.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_108_054G1_scaffold_72_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1857..3056
DNA (1200bp) protein (400aa)
Peptidase, M23/M37 family n=2 Tax=Clostridium perfringens RepID=Q0TUN5_CLOP1
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:EDS79649.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_054G1_scaffold_72_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3279..4142
DNA (864bp) protein (288aa)
5'-nucleotidase n=3 Tax=Clostridium perfringens RepID=H7CRZ7_CLOPF
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EDT72378.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
5'-nucleotidase
L3_108_054G1_scaffold_72_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4347..4544)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWH8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_72_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5095..5952)
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01710};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Energy-coupling factor transporter ATP-binding protein EcfA2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ECFA2_CLOPS
cbiO; cobalt transporter ATP-binding subunit
L3_108_054G1_scaffold_72_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5967..6737)
DNA (771bp) protein (257aa)
Cobalt ABC transporter, permease protein CbiQ n=3 Tax=Clostridium perfringens RepID=Q0TUN9_CLOP1
cbiQ; cobalt ABC transporter permease CbiQ
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EDT27283.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_054G1_scaffold_72_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6721..7032)
DNA (312bp) protein (104aa)
Cobalt transport protein CbiN n=10 Tax=Clostridium perfringens RepID=CBIN_CLOPE
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_72_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7032..7775)
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS05_CLOPF
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
cbiM; cobalt transport protein CbiM
L3_108_054G1_scaffold_72_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8652..13538)
DNA (4887bp) protein (1629aa)
Hyaluronidase {ECO:0000313|EMBL:EDT15476.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDT15476.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Hyaluronidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS06_CLOPF
nagH; hyaluronidase
L3_108_054G1_scaffold_72_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13795..14184
DNA (390bp) protein (130aa)
Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS07_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT15478.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_054G1_scaffold_72_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14383..15222)
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_72_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15413..16300)
DNA (888bp) protein (296aa)
ROK family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFA3_CLOPF
ROK family protein {ECO:0000313|EMBL:EDT27358.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ROK family protein
L3_108_054G1_scaffold_72_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16456..16908)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BS10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_72_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17019..18536)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNZ2_CLOPE
hypothetical protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDS79687.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_054G1_scaffold_72_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18639..19505)
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L3_108_054G1_scaffold_72_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19542..20207)
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Clostridium perfringens RepID=NANE_CLOP1
L3_108_054G1_scaffold_72_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20493..21161)
DNA (669bp) protein (223aa)
Nitroreductase family protein n=3 Tax=Clostridium perfringens RepID=B1BS14_CLOPF
Nitroreductase family protein {ECO:0000313|EMBL:EDT27292.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nitroreductase
L3_108_054G1_scaffold_72_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21430..22497
DNA (1068bp) protein (356aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFA9_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT27277.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter ATP-binding protein
L3_108_054G1_scaffold_72_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22500..23318
DNA (819bp) protein (273aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKL7_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDS79673.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease
L3_108_054G1_scaffold_72_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23323..24114
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V181_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT72435.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_108_054G1_scaffold_72_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24446..25420)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW22_CLOPF
lipA; lipase
Probable lipase {ECO:0000313|EMBL:BAB79885.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_054G1_scaffold_72_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25770..26225)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
S-ribosylhomocysteine lyase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7B4_CLOPF
luxS; S-ribosylhomocysteinase
L3_108_054G1_scaffold_72_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26323..27231)
DNA (909bp) protein (303aa)
Cysteine synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW24_CLOPF
cysteine synthase family protein
Cysteine synthase family protein {ECO:0000313|EMBL:ABG85476.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_054G1_scaffold_72_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27218..28372)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
metB; cystathionine beta-lyase
L3_108_054G1_scaffold_72_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28436..29059)
DNA (624bp) protein (208aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS22_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT15527.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
UbiE/COQ5 family methlytransferase
L3_108_054G1_scaffold_72_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29780..30247
DNA (468bp) protein (156aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=MSCL_CLOPS
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000255|HAMAP-Rule:MF_00115}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_054G1_scaffold_72_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30386..33700)
DNA (3315bp) protein (1105aa)
Microbial collagenase {ECO:0000313|EMBL:EDT15459.1}; EC=3.4.24.3 {ECO:0000313|EMBL:EDT15459.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Microbial collagenase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS24_CLOPF
colA; collagenase
L3_108_054G1_scaffold_72_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34244..34699)
DNA (456bp) protein (152aa)
Arginine regulator n=6 Tax=Clostridium perfringens RepID=ARGR1_CLOPE
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_054G1_scaffold_72_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34773..35717)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=4 Tax=Clostridium perfringens RepID=ARCC_CLOPE
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_72_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35777..37213)
DNA (1437bp) protein (479aa)
Arginine/ornithine antiporter n=2 Tax=Clostridium perfringens RepID=ARCD_CLOPE
arcD; arginine/ornithine antiporter
Arginine/ornithine antiporter; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 82 in total

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