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L3_108_054G1_scaffold_79

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Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_79_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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313..582
DNA (270bp) protein (90aa)
Caudovirales tail fiber assembly protein n=2 Tax=Escherichia coli RepID=V1AZA2_ECOLX
tail fiber assembly protein
Caudovirales tail fiber assembly family protein {ECO:0000313|EMBL:KEN91237.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_108_054G1_scaffold_79_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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697..867
DNA (171bp) protein (57aa)
Putative tail component n=3 Tax=Escherichia coli RepID=B7ML72_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK18604.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_108_054G1_scaffold_79_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1355..1861)
DNA (507bp) protein (169aa)
Uncharacterized protein n=84 Tax=Escherichia RepID=B7ML73_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR02715.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_108_054G1_scaffold_79_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1907..2407)
DNA (501bp) protein (167aa)
Uncharacterized protein n=72 Tax=Escherichia RepID=B7ML74_ECO45
yciF; structural proteins
Putative structural proteins {ECO:0000313|EMBL:ABE07005.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_108_054G1_scaffold_79_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2493..2672)
DNA (180bp) protein (60aa)
Uncharacterized protein n=73 Tax=Escherichia RepID=Q1RCA8_ECOUT
hypothetical protein
Protein {ECO:0000313|EMBL:CKI12070.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_054G1_scaffold_79_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3053..3859)
DNA (807bp) protein (269aa)
trpA; Tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Tryptophan synthase alpha chain n=105 Tax=Escherichia RepID=TRPA_ECO45
L3_108_054G1_scaffold_79_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3859..5052)
DNA (1194bp) protein (398aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CKI12115.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Tryptophan synthase beta chain n=74 Tax=Escherichia RepID=TRPB_ECO45
L3_108_054G1_scaffold_79_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5064..6422)
DNA (1359bp) protein (453aa)
trpC; tryptophan biosynthesis protein trpCF (EC:4.1.1.48 5.3.1.24)
Anthranilate isomerase n=65 Tax=Escherichia RepID=A1AAN2_ECOK1
Tryptophan biosynthesis protein trpCF {ECO:0000313|EMBL:EQX28807.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_054G1_scaffold_79_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6426..8021)
DNA (1596bp) protein (532aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
trpD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:2.4.2.18 4.1.1.48)
Anthranilate synthase component II n=297 Tax=Enterobacteriaceae RepID=E2QLM3_ECOLX
L3_108_054G1_scaffold_79_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8021..9583)
DNA (1563bp) protein (521aa)
trpE; anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000256|PIRNR:PIRNR001373}; EC=4.1.3.27 {ECO:0000256|PIRNR:PIRNR001373};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Anthranilate synthase component 1 n=132 Tax=Escherichia RepID=A1AAN4_ECOK1
L3_108_054G1_scaffold_79_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9857..10738
DNA (882bp) protein (294aa)
Protein trpH n=258 Tax=Escherichia RepID=E2QLM5_ECOLX
yciV; hypothetical protein
PHP domain protein {ECO:0000313|EMBL:EHU60352.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_108_054G1_scaffold_79_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10735..11355
DNA (621bp) protein (207aa)
Uncharacterized protein YciO n=1300 Tax=Enterobacteriaceae RepID=YCIO_ECOL6
yciO; hypothetical protein
YciO family {ECO:0000313|EMBL:CDL46421.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_108_054G1_scaffold_79_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11380..13278
DNA (1899bp) protein (633aa)
Uncharacterized protein n=64 Tax=Escherichia RepID=Q1RCA0_ECOUT
Putative inner membrane protein {ECO:0000313|EMBL:CKI12240.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_108_054G1_scaffold_79_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13491..14366
DNA (876bp) protein (292aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Ribosomal large subunit pseudouridine synthase B n=477 Tax=Escherichia RepID=RLUB_ECOL6
23S rRNA pseudouridylate synthase B
L3_108_054G1_scaffold_79_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14406..14996)
DNA (591bp) protein (197aa)
btuR; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase {ECO:0000313|EMBL:CAR02727.1}; EC=2.5.1.- {ECO:0000313|EMBL:CAR02727.1};; EC=2.5.1.17 {ECO:0000313|EMBL:CAR02727.1};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Cob(I)alamin adenolsyltransferase n=86 Tax=Escherichia RepID=A1AAN9_ECOK1
L3_108_054G1_scaffold_79_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14993..15751)
DNA (759bp) protein (253aa)
yciK; short chain dehydrogenase (EC:1.-.-.-)
Oxidoreductase, short chain dehydrogenase/reductase family n=80 Tax=Escherichia RepID=D5D1S3_ECOKI
Oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system protein {ECO:0000313|EMBL:EQX28815.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_054G1_scaffold_79_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15971..17020
DNA (1050bp) protein (350aa)
sohB; periplasmic protease (EC:3.4.21.-)
Protease sohB n=166 Tax=Escherichia RepID=E2QLN1_ECOLX
Putative protease sohB {ECO:0000313|EMBL:KEJ59857.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_108_054G1_scaffold_79_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17056..17307)
DNA (252bp) protein (84aa)
Protein YciN n=1414 Tax=cellular organisms RepID=YCIN_ECO57
hypothetical protein
PF10692 family protein {ECO:0000313|EMBL:EII23253.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_108_054G1_scaffold_79_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17687..20284
DNA (2598bp) protein (866aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
DNA topoisomerase 1 n=256 Tax=Bacteria RepID=E2QLN3_ECOLX
L3_108_054G1_scaffold_79_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20494..21468
DNA (975bp) protein (325aa)
HTH-type transcriptional regulator CysB n=1291 Tax=Enterobacteriaceae RepID=CYSB_ECO57
LysR family transcriptional regulator
HTH-type transcriptional regulator CysB {ECO:0000313|EMBL:KDW81966.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_108_054G1_scaffold_79_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21799..21927
DNA (129bp) protein (43aa)
Uncharacterized protein n=320 Tax=Escherichia RepID=B7MLV0_ECO45
ymiA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE07023.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_108_054G1_scaffold_79_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21930..22097
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=3 Tax=Escherichia coli RepID=D5D1S9_ECOKI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW99080.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_108_054G1_scaffold_79_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22211..22306
DNA (96bp) protein (32aa)
Uncharacterized protein n=22 Tax=Escherichia coli RepID=L2V7K5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQX28822.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_054G1_scaffold_79_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22456..25131
DNA (2676bp) protein (892aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Aconitate hydratase 1 n=96 Tax=Escherichia RepID=A1AAP5_ECOK1
L3_108_054G1_scaffold_79_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25195..25785)
DNA (591bp) protein (197aa)
ribA; GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
GTP cyclohydrolase-2 n=380 Tax=Escherichia RepID=RIBA_ECO45
L3_108_054G1_scaffold_79_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25955..26719
DNA (765bp) protein (255aa)
pgpB; phosphatidylglycerophosphatase B (EC:3.1.3.27)
Non-essential phosphatidylglycerophosphate phosphatase n=99 Tax=Escherichia RepID=A1AAP7_ECOK1
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:EQX28825.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_108_054G1_scaffold_79_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26868..27176
DNA (309bp) protein (103aa)
Uncharacterized protein n=311 Tax=Escherichia RepID=B7MLV5_ECO45
yciS; hypothetical protein
Inner membrane protein yciS {ECO:0000313|EMBL:EOW99084.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_108_054G1_scaffold_79_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27183..28352
DNA (1170bp) protein (390aa)
Uncharacterized protein YciM n=1000 Tax=Enterobacteriaceae RepID=YCIM_ECO57
hypothetical protein
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_108_054G1_scaffold_79_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28484..29281
DNA (798bp) protein (266aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; Orotidine 5'-phosphate decarboxylase; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
Orotidine 5'-phosphate decarboxylase n=4 Tax=Escherichia coli RepID=F4V1E8_ECOLX
L3_108_054G1_scaffold_79_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29281..29607
DNA (327bp) protein (109aa)
Uncharacterized protein n=151 Tax=Escherichia RepID=B7MLV8_ECO45
yciH; translation initiation factor Sui1
Putative translation initiation factor {ECO:0000313|EMBL:ABE07031.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Displaying items 1-30 of 101 in total

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