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L3_108_054G1_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_90_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

203..571
DNA (369bp) protein (123aa)
GntR-family transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QZS2_CLOBU
GntR-family transcriptional regulator {ECO:0000313|EMBL:ETI91059.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
yhcF; HTH-type transcriptional regulator YhcF
L3_108_054G1_scaffold_90_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

572..1273
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQM1_CLOBO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES49997.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter ATP-binding protein
L3_108_054G1_scaffold_90_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1267..2058
DNA (792bp) protein (264aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V127_CLOBA
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KIL08893.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_108_054G1_scaffold_90_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2192..2716
DNA (525bp) protein (175aa)
PAP2 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN77_9CLOT
PAP2 family protein {ECO:0000313|EMBL:EKY29454.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
membrane-associated phospholipid phosphatase
L3_108_054G1_scaffold_90_5
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2724..3680
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031D6F9D
Uncharacterized protein {ECO:0000313|EMBL:EQB86627.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_108_054G1_scaffold_90_6
unknown

Not on your lists

comp(3729..4463)
DNA (735bp) protein (245aa)

This feature has no annotations

L3_108_054G1_scaffold_90_7
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4589..4948
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDL9_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KGM95002.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
hypothetical protein
L3_108_054G1_scaffold_90_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5027..6427)
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDN0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EKY25780.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
multidrug transporter MatE
L3_108_054G1_scaffold_90_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6564..7346
DNA (783bp) protein (261aa)
hisK; Histidinol-phosphatase (EC:3.1.3.15)
Histidinol-phosphatase {ECO:0000313|EMBL:CDM69673.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CDM69673.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Histidinol phosphate phosphatase HisJ family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5C8_9CLOT
L3_108_054G1_scaffold_90_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7416..8702
DNA (1287bp) protein (429aa)
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESU2_9CLOT
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:CDG02290.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
phosphodiesterase/nucleotide pyrophosphatase family protein
L3_108_054G1_scaffold_90_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8715..10001
DNA (1287bp) protein (429aa)
MFS transporter n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002885A30
MFS transporter {ECO:0000313|EMBL:KJU72957.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
major facilitator transporter
L3_108_054G1_scaffold_90_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10061..10618)
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV00_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EOD00457.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
GCN5-like N-acetyltransferase
L3_108_054G1_scaffold_90_13
unknown

Not on your lists

10723..11178
DNA (456bp) protein (152aa)

This feature has no annotations

L3_108_054G1_scaffold_90_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11346..12317
DNA (972bp) protein (324aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIA7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY27400.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium transport system ATP-binding protein
L3_108_054G1_scaffold_90_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..13567
DNA (1251bp) protein (417aa)
ABC-2 transporter family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DXV4_CLOSO
Putative ABC transporter permease {ECO:0000313|EMBL:CEP99593.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
sodium transport system permease
L3_108_054G1_scaffold_90_16
unknown

Not on your lists

comp(13722..13895)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_108_054G1_scaffold_90_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14164..14412
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7Y9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84190.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_90_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14414..15481
DNA (1068bp) protein (356aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF96_9CLOT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEH98500.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE
L3_108_054G1_scaffold_90_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15472..16848
DNA (1377bp) protein (459aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH07_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEH98499.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG
L3_108_054G1_scaffold_90_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16857..18044
DNA (1188bp) protein (396aa)
Putative GTP-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EY01_9CLOT
Putative GTP-binding protein {ECO:0000313|EMBL:CDG01146.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hydF; [FeFe] hydrogenase H-cluster maturation GTPase HydF
L3_108_054G1_scaffold_90_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18265..18861
DNA (597bp) protein (199aa)
lacA; isomerase/acetyltransferase (EC:2.3.1.18)
Isomerase/acetyltransferase {ECO:0000313|EMBL:AIY82309.1}; EC=2.3.1.18 {ECO:0000313|EMBL:AIY82309.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
maltose O-acetyltransferase n=1 Tax=Lactobacillus farciminis RepID=UPI00021979CF
L3_108_054G1_scaffold_90_22
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18966..19652
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3E5_CLOA9
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFS79697.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_108_054G1_scaffold_90_23
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19654..20673
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
histidine kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288EFD7
signal transduction histidine kinase
L3_108_054G1_scaffold_90_24
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20993..21655
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A12F7
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS76514.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
antimicrobial peptide ABC transporter ATPase
L3_108_054G1_scaffold_90_25
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21659..23332
DNA (1674bp) protein (558aa)
ABC-type transport system, permease n=1 Tax=Clostridium difficile E7 RepID=U4ATL8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67569.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_108_054G1_scaffold_90_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23354..24703
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XX22_9CLOT
ftsX-like permease family protein
Uncharacterized protein {ECO:0000313|EMBL:KJU73022.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_054G1_scaffold_90_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24791..25159
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CP01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI92219.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L3_108_054G1_scaffold_90_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25160..25951)
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LXK2_CLOB8
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABR35082.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_108_054G1_scaffold_90_29
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26054..27256
DNA (1203bp) protein (401aa)
Putative Transporter, major facilitator family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZK1_9CLOT
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:CDM69025.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_108_054G1_scaffold_90_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27544..28410
DNA (867bp) protein (289aa)
ABC transporter, ATP binding-protein n=1 Tax=Clostridium intestinale URNW RepID=U2N4F6_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84681.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 95 in total

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