ggKbase home page

L3_108_054G1_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_96_1
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..515
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=4 Tax=Eubacteriaceae bacterium CM5 RepID=G9XG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15516.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
transposase, ISSpnII
L3_108_054G1_scaffold_96_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1088..2497
DNA (1410bp) protein (470aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=4 Tax=Clostridium clostridioforme RepID=N9XSK7_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:ENZ58525.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycoside/pentoside/hexuronide:cation symporter, GPH family
L3_108_054G1_scaffold_96_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2602..4416
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37919.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Glycoside Hydrolase Family 2 candidate b-glucuronidase
L3_108_054G1_scaffold_96_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4591..5979
DNA (1389bp) protein (463aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=UXAC_CALBD
L3_108_054G1_scaffold_96_5
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5988..7562
DNA (1575bp) protein (525aa)
Fructuronate reductase {ECO:0000313|EMBL:EGY80067.1}; EC=1.1.1.57 {ECO:0000313|EMBL:EGY80067.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
Fructuronate reductase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D336_9FIRM
mannitol dehydrogenase domain-containing protein
L3_108_054G1_scaffold_96_6
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7564..8634
DNA (1071bp) protein (357aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D337_9FIRM
L3_108_054G1_scaffold_96_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8835..10058)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YLK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65211.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
two-component system, response regulator YesN
L3_108_054G1_scaffold_96_8
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10157..10966
DNA (810bp) protein (270aa)
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EEW37785.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EEW37785.1};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Haloacid dehalogenase-like hydrolase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NF76_9LACT
hypothetical protein
L3_108_054G1_scaffold_96_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11006..12778
DNA (1773bp) protein (591aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1134823 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV168.;"
Beta-N-acetylglucosaminidase/beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 protein n=1 Tax=Enterococcus faecium ERV168 RepID=J6ULT2_ENTFC
L3_108_054G1_scaffold_96_10
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12937..13968)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA86153.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein
L3_108_054G1_scaffold_96_11
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14070..15002
DNA (933bp) protein (311aa)
LysR substrate binding domain protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTV6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EFA90052.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
LysR family transcriptional regulator
L3_108_054G1_scaffold_96_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(15008..15535)
DNA (528bp) protein (176aa)
Predicted membrane protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D135_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCX73915.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Predicted membrane protein
L3_108_054G1_scaffold_96_13
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15615..17807)
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HQJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL17761.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
methyl-accepting chemotaxis sensory transducer
L3_108_054G1_scaffold_96_14
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17912..18973)
DNA (1062bp) protein (354aa)
Ribonuclease BN n=3 Tax=Paenibacillus mucilaginosus RepID=F8F7C0_PAEMK
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AEI45929.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
L3_108_054G1_scaffold_96_15
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19119..20558)
DNA (1440bp) protein (480aa)
ATP-binding protein n=1 Tax=Streptococcus ovis RepID=UPI0003688052
Uncharacterized protein {ECO:0000313|EMBL:EHR35635.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
L3_108_054G1_scaffold_96_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20819..21193
DNA (375bp) protein (125aa)
Sulfurtransferase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5J1D2_9FIRM
phage shock protein E
Tax=BJP_IG2102_Clostridiales_34_350
L3_108_054G1_scaffold_96_17
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21475..21879
DNA (405bp) protein (135aa)
Large-conductance mechanosensitive channel n=1 Tax=Eubacterium sp. AS15 RepID=J5GY80_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
large conductance mechanosensitive channel
L3_108_054G1_scaffold_96_18
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22042..23100
DNA (1059bp) protein (353aa)
Acyltransferase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QGD9_9FIRM
Acyltransferase {ECO:0000313|EMBL:EFM40163.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
hypothetical protein
L3_108_054G1_scaffold_96_19
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23189..24778)
DNA (1590bp) protein (530aa)
Peptidase, C69 family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMD6_9SPIO
Peptidase, C69 family {ECO:0000313|EMBL:EEV21353.1}; TaxID=596324 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii ATCC 35580.;"
dipeptidase
L3_108_054G1_scaffold_96_20
Fusobacterium sp. oral taxon 370, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(24879..26381)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. oral taxon 370 str. F0437 RepID=G6C3Q4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHI78544.1}; TaxID=861452 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. oral taxon 370 str. F0437.;"
hypothetical protein
L3_108_054G1_scaffold_96_21
Fusobacterium sp. oral taxon 370, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(26574..27509)
DNA (936bp) protein (312aa)
arcC; Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Fusobacterium sp. oral taxon 370 str. F0437 RepID=G6C3Q5_9FUSO
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=861452 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. oral taxon 370 str. F0437.;"
L3_108_054G1_scaffold_96_22
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27524..28516)
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
arcB; Ornithine carbamoyltransferase, catabolic (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5Y2_9FIRM
L3_108_054G1_scaffold_96_23
Fusobacterium sp. oral taxon 370, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(28629..29846)
DNA (1218bp) protein (406aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=861452 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. oral taxon 370 str. F0437.;"
arcA; Arginine deiminase (EC:3.5.3.6)
Arginine deiminase n=1 Tax=Fusobacterium sp. oral taxon 370 str. F0437 RepID=G6C3Q8_9FUSO
L3_108_054G1_scaffold_96_24
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30147..31391)
DNA (1245bp) protein (415aa)
Transcriptional regulator, AraC family n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5Y0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFI42293.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
AraC family transcriptional regulator
L3_108_054G1_scaffold_96_25
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31938..32936)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HUH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15870.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
Catabolite control protein A
L3_108_054G1_scaffold_96_26
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33135..34727)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HU18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL16664.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
exported protein of unknown function
L3_108_054G1_scaffold_96_27
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34884..36293)
DNA (1410bp) protein (470aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
Glycogen synthase n=2 Tax=unclassified Eubacteriaceae RepID=G9XCR3_9FIRM
glgA; glycogen synthase
L3_108_054G1_scaffold_96_28
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36290..37411)
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HRN6_9FIRM
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EHL18460.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
glgD; glycogen biosynthesis protein GlgD
L3_108_054G1_scaffold_96_29
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37404..38552)
DNA (1149bp) protein (383aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=3 Tax=unclassified Eubacteriaceae RepID=G9XCR5_9FIRM
L3_108_054G1_scaffold_96_30
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38780..39670)
DNA (891bp) protein (297aa)
ParB-like protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J4WI04_9FIRM
ParB-like protein {ECO:0000313|EMBL:EJU24721.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
hypothetical protein
Displaying items 1-30 of 59 in total

View Taxonomy