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L3_108_054G1_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_161_1
unknown

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comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

L3_108_054G1_scaffold_161_2
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(254..1432)
DNA (1179bp) protein (393aa)
thlA; Acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JKX8_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ERJ80687.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113 str. W5053.;"
L3_108_054G1_scaffold_161_3
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1487..2263)
DNA (777bp) protein (259aa)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EJP19646.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EJP19646.1};; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Clostridiales RepID=E0QIU2_9FIRM
L3_108_054G1_scaffold_161_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2468..3049)
DNA (582bp) protein (194aa)
Lysophospholipase L1-like esterase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KAJ0_CLOPA
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:KIE48488.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arylesterase
L3_108_054G1_scaffold_161_5
unknown

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comp(3087..4388)
DNA (1302bp) protein (434aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=3 Tax=Clostridiales RepID=D4MYA9_9FIRM
RNA polymerase, sigma 54 subunit, RpoN/SigL
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:CBL37604.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_108_054G1_scaffold_161_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4415..4693)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRR9_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD66964.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_108_054G1_scaffold_161_7
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4841..6220)
DNA (1380bp) protein (460aa)
membrane protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DE378F
Uncharacterized protein {ECO:0000313|EMBL:EGY77355.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
hypothetical protein
L3_108_054G1_scaffold_161_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6220..6504)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TMG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73425.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_108_054G1_scaffold_161_9
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6633..7934)
DNA (1302bp) protein (434aa)
4-hydroxybutyrate coenzyme A transferase {ECO:0000313|EMBL:EFM38414.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFM38414.1};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
4-hydroxybutyrate coenzyme A transferase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QLC4_9FIRM
acetyl-CoA hydrolase/transferase
L3_108_054G1_scaffold_161_10
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8206..9678)
DNA (1473bp) protein (491aa)
Gamma-aminobutyrate metabolism dehydratase/isomerase {ECO:0000313|EMBL:EFM38416.1}; EC=4.2.1.- {ECO:0000313|EMBL:EFM38416.1};; EC=5.3.3.3 {ECO:0000313|EMBL:EFM38416.1};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
Gamma-aminobutyrate metabolism dehydratase/isomerase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QLC6_9FIRM
abfD; gamma-aminobutyrate metabolism dehydratase/isomerase
L3_108_054G1_scaffold_161_11
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10037..11458)
DNA (1422bp) protein (474aa)
Sigma-54-dependent transcriptional regulator n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D701_9FIRM
Sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:EGY76321.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
sigma-54 dependent transcription regulator
L3_108_054G1_scaffold_161_12
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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11688..12974
DNA (1287bp) protein (429aa)
Putative DNA modification/repair radical SAM protein n=2 Tax=Clostridiales RepID=E0QKJ6_9FIRM
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EJP23351.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
radical SAM domain-containing protein
L3_108_054G1_scaffold_161_13
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12998..13747
DNA (750bp) protein (250aa)
Putative DNA metabolism protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QKJ7_9FIRM
Putative DNA metabolism protein {ECO:0000313|EMBL:EFM38735.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
hypothetical protein
L3_108_054G1_scaffold_161_14
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13841..14494)
DNA (654bp) protein (218aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Acetate CoA-transferase YdiF n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFU4_ALKOO
coenzyme A transferase
L3_108_054G1_scaffold_161_15
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14504..15286)
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Clostridium tetani 12124569 RepID=U6F2J3_CLOTA
3-hydroxybutyryl-CoA dehydratase
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:CDI50630.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_108_054G1_scaffold_161_16
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15715..18255)
DNA (2541bp) protein (847aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XA10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20256.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
negative regulator of genetic competence clpC/mecB
L3_108_054G1_scaffold_161_17
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18343..19266)
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Eubacterium sp. AS15 RepID=J5HAE3_9FIRM
L3_108_054G1_scaffold_161_18
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19270..20145)
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
truB; tRNA pseudouridine synthase (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XA12_9FIRM
L3_108_054G1_scaffold_161_19
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20138..21103)
DNA (966bp) protein (322aa)
DHHA1 domain protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5WSD3_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EJU24047.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
putative RNA-binding protein
L3_108_054G1_scaffold_161_20
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21200..21625)
DNA (426bp) protein (142aa)
Ribosome-binding factor A n=3 Tax=unclassified Eubacteriaceae RepID=G9X1V9_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
ribosome-binding factor A
L3_108_054G1_scaffold_161_21
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21633..23927)
DNA (2295bp) protein (765aa)
Translation initiation factor IF-2 n=1 Tax=Eubacterium sp. AS15 RepID=J4TLC8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
infB; Translation initiation factor IF-2
L3_108_054G1_scaffold_161_22
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23890..24231)
DNA (342bp) protein (114aa)
Ribosomal protein L7Ae n=3 Tax=unclassified Eubacteriaceae RepID=J6HNY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20263.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
50S ribosomal protein L7A
L3_108_054G1_scaffold_161_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24224..24493)
DNA (270bp) protein (90aa)
YlxR n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSF8_CLOSD
ylxR; YlxR
YlxR {ECO:0000313|EMBL:CBH21812.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L3_108_054G1_scaffold_161_24
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24509..25651)
DNA (1143bp) protein (381aa)
Transcription termination factor NusA n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XA19_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
nusA; transcription translation coupling factor involved in Rho-dependent transcription termination
L3_108_054G1_scaffold_161_25
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25751..26212)
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=1 Tax=Eubacterium sp. AS15 RepID=J4TLB2_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
hypothetical protein
L3_108_054G1_scaffold_161_26
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26381..29008)
DNA (2628bp) protein (876aa)
ppdK; Pyruvate, phosphate dikinase (Pyruvate, orthophosphate dikinase) (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HU25_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EHL17009.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
L3_108_054G1_scaffold_161_27
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29048..29875)
DNA (828bp) protein (276aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HP64_9FIRM
yqfL; positive regulator of gluconeogenesis
L3_108_054G1_scaffold_161_28
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29884..30261)
DNA (378bp) protein (126aa)
CBS domain protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D4J8_9FIRM
CBS domain protein {ECO:0000313|EMBL:EGY79545.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
transcriptional regulator
L3_108_054G1_scaffold_161_29
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30569..31903)
DNA (1335bp) protein (445aa)
tRNA methylthiotransferase YqeV n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QK36_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFM38882.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
hypothetical protein
L3_108_054G1_scaffold_161_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32007..33812)
DNA (1806bp) protein (602aa)
Copper amine oxidase N-terminal domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KXC0_9FIRM
Copper amine oxidase N-terminal domain protein {ECO:0000313|EMBL:EFR33450.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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