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L3_108_054G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_181_1
unknown

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comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

L3_108_054G1_scaffold_181_2
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(278..1435)
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XFK9_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
dnaJ; chaperone Hsp40, co-chaperone with DnaK
L3_108_054G1_scaffold_181_3
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1631..3502)
DNA (1872bp) protein (624aa)
Chaperone protein DnaK n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XFK7_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
dnaK; chaperone Hsp70, co-chaperone with DnaJ
L3_108_054G1_scaffold_181_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3583..4227)
DNA (645bp) protein (215aa)
Protein GrpE n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSR0_CLOSD
grpE; GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L3_108_054G1_scaffold_181_5
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4246..5280)
DNA (1035bp) protein (345aa)
Heat-inducible transcription repressor hrcA n=3 Tax=unclassified Eubacteriaceae RepID=G9XFK5_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
hrcA; transcriptional regulator of heat-shock genes
L3_108_054G1_scaffold_181_6
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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5867..6118
DNA (252bp) protein (84aa)
Protein translocase subunit SecE n=2 Tax=unclassified Eubacteriaceae RepID=J5U3K3_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
secE; preprotein translocase subunit
L3_108_054G1_scaffold_181_7
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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6128..6661
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=2 Tax=unclassified Eubacteriaceae RepID=G9X2B8_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
transcription termination/antitermination factor NusG
L3_108_054G1_scaffold_181_8
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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6681..7106
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=unclassified Eubacteriaceae RepID=G9X2B9_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
rplK; 50S ribosomal subunit protein L11
L3_108_054G1_scaffold_181_9
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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7167..7865
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Clostridiales RepID=E0QJ44_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
50S ribosomal protein L1
L3_108_054G1_scaffold_181_10
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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8015..8554
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HU04_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
rplJ; 50S ribosomal subunit protein L10
L3_108_054G1_scaffold_181_11
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8585..8956
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQ77_FILAD
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_108_054G1_scaffold_181_12
Alloprevotella rava, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9451..10041
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Alloprevotella rava F0323 RepID=G5GAR8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHG23599.1}; TaxID=679199 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Alloprevotella rava F0323.;"
L3_108_054G1_scaffold_181_13
unknown

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10454..10873
DNA (420bp) protein (140aa)

This feature has no annotations

L3_108_054G1_scaffold_181_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11153..14293
DNA (3141bp) protein (1047aa)
Signal transduction protein containing an EAL domain n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LIM7_ACEWD
signal transduction protein containing an EAL domain
Signal transduction protein containing an EAL domain {ECO:0000313|EMBL:AFA48601.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_108_054G1_scaffold_181_15
Vagococcus lutrae, Vagococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14396..15703)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Vagococcus lutrae LBD1 RepID=V6Q441_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EST89507.1}; TaxID=1408226 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.;" source="Vagococcus lutrae LBD1.;"
amino acid permease
L3_108_054G1_scaffold_181_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(15820..16701)
DNA (882bp) protein (294aa)
CorA-like Mg2+ transporter n=1 Tax=Enterococcus faecium EnGen0038 RepID=L2QEX4_ENTFC
CorA-like Mg2+ transporter {ECO:0000313|EMBL:ELB52655.1}; TaxID=1138921 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0038.;"
corA2; MIT family metal ion transporter CorA
L3_108_054G1_scaffold_181_17
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16747..18306)
DNA (1560bp) protein (520aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium sp. AS15 RepID=J5H612_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJP26180.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
yfmM; ATPase component of ABC transporter (Two ATPase domains)
L3_108_054G1_scaffold_181_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18573..18875)
DNA (303bp) protein (101aa)
Putative Integrase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FMJ3_9CLOT
Putative Integrase family protein {ECO:0000313|EMBL:CDG01844.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_108_054G1_scaffold_181_19
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19109..19537
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XZK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02133.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L3_108_054G1_scaffold_181_20
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19965..20387
DNA (423bp) protein (141aa)
Ferric uptake regulator family protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J4W1B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10566.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
putative Zur
L3_108_054G1_scaffold_181_21
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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20377..22272
DNA (1896bp) protein (632aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EJP23120.1}; EC=3.4.-.- {ECO:0000313|EMBL:EJP23120.1};; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5GTU4_9FIRM
Dap2.2; dipeptidyl aminopeptidase/acylaminoacyl-peptidase
L3_108_054G1_scaffold_181_22
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22309..22938
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
Guanylate kinase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QG56_9FIRM
guanylate kinase
L3_108_054G1_scaffold_181_23
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22938..24473
DNA (1536bp) protein (512aa)
Mg chelatase-like protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QG57_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EFM40222.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
Mg chelatase-like protein
L3_108_054G1_scaffold_181_24
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24475..24825
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19541.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
hypothetical protein
L3_108_054G1_scaffold_181_25
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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24861..27503
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5U5B1_9FIRM
L3_108_054G1_scaffold_181_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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27608..27799
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J884_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30410.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Putative stress-responsive transcriptional regulator
L3_108_054G1_scaffold_181_27
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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28245..29120
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Eubacterium sp. AS15 RepID=J4TFX5_9FIRM
glucose-1-phosphate thymidylyltransferase
L3_108_054G1_scaffold_181_28
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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29176..29952
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MLK6_CALBD
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
L3_108_054G1_scaffold_181_29
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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29967..30695
DNA (729bp) protein (243aa)
ABC transporter related n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MLK7_CALBD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM59215.1}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
L3_108_054G1_scaffold_181_30
GWA1_OD1_36_12, Parcubacteria, Bacteria

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30658..31866
DNA (1209bp) protein (403aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWB2_CLOPS
Uncharacterized protein {ECO:0000313|EMBL:KKP93695.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
teichuronic acid biosynthesis glycosyl transferase
Displaying items 1-30 of 34 in total

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