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L3_108_054G1_scaffold_188

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_188_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1191..1883
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN80_CLOPF
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sfsA; sugar fermentation stimulation protein A
L3_108_054G1_scaffold_188_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2297..2836
DNA (540bp) protein (180aa)
NUDIX family hydrolase n=5 Tax=Clostridium perfringens RepID=H7CT33_CLOPF
NUDIX family hydrolase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDT14532.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_188_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3246..4541
DNA (1296bp) protein (432aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Clostridium perfringens RepID=B1RJB5_CLOPF
L3_108_054G1_scaffold_188_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4998..5216
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BUS6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14510.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_188_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5219..5749
DNA (531bp) protein (177aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF
L3_108_054G1_scaffold_188_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5774..7927
DNA (2154bp) protein (718aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CN85_CLOPF
ftsH; ATP-dependent metalloprotease FtsH
L3_108_054G1_scaffold_188_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8149..10269
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative helicase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST1_CLOPF
hypothetical protein
L3_108_054G1_scaffold_188_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10724..11560
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST2_CLOPF
amino acid ABC transporter
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80306.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_054G1_scaffold_188_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11591..12265
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
His/Glu/Gln/Arg/opine ABC transporter permease
L3_108_054G1_scaffold_188_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..12981
DNA (723bp) protein (241aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=Q0TTK4_CLOP1
amino acid ABC transporter
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80308.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_054G1_scaffold_188_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13171..14979
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1
Sulfatase family protein {ECO:0000313|EMBL:EDT14521.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sulfatase
L3_108_054G1_scaffold_188_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15074..16918
DNA (1845bp) protein (615aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK2_CLOP1
Sulfatase domain protein {ECO:0000313|EMBL:EDT22517.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sulfatase
L3_108_054G1_scaffold_188_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17022..18203)
DNA (1182bp) protein (394aa)
Cation efflux family protein n=2 Tax=Clostridium perfringens RepID=B1BEZ7_CLOPF
cation efflux family protein
Cation efflux family protein {ECO:0000313|EMBL:EDS81609.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_054G1_scaffold_188_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18460..20367
DNA (1908bp) protein (636aa)
Probable enterotoxin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMT2_CLOPE
Probable enterotoxin {ECO:0000313|EMBL:BAB80312.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
entD; enterotoxin
L3_108_054G1_scaffold_188_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20509..21804
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
M18 family aminopeptidase n=3 Tax=Clostridium perfringens RepID=B1RST8_CLOPF
aminopeptidase 2
L3_108_054G1_scaffold_188_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21897..22091)
DNA (195bp) protein (65aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT47_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14543.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_054G1_scaffold_188_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22484..23323
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=3 Tax=Clostridium perfringens RepID=Q0TTJ7_CLOP1
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_054G1_scaffold_188_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23529..26858)
DNA (3330bp) protein (1110aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNA0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17851.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
putative transporter
L3_108_054G1_scaffold_188_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27119..28714)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
prfC; peptide chain release factor 3
L3_108_054G1_scaffold_188_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28928..29533)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CT51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80318.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_054G1_scaffold_188_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29925..30725
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF
HAD family hydrolase
L3_108_054G1_scaffold_188_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30757..31419
DNA (663bp) protein (221aa)
Galactosyl transferase CpsE {ECO:0000313|EMBL:EDT14511.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT14511.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Galactosyl transferase CpsE n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU3_CLOPF
glycosyltransferase
L3_108_054G1_scaffold_188_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31438..32160
DNA (723bp) protein (241aa)
tagA; N-acetyl-mannosamine transferase (EC:2.4.1.187)
N-acetyl-mannosamine transferase {ECO:0000313|EMBL:ABG86214.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ABG86214.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
N-acetyl-mannosamine transferase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVD8_CLOPS
L3_108_054G1_scaffold_188_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32164..33261
DNA (1098bp) protein (366aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU5_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT14508.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycosyl transferase, group 1 family protein
L3_108_054G1_scaffold_188_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33254..34690
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14512.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_054G1_scaffold_188_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34770..35903
DNA (1134bp) protein (378aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU7_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT14523.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycosyl transferase, group 1 family protein
L3_108_054G1_scaffold_188_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35920..36720
DNA (801bp) protein (267aa)
LicD family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU8_CLOPF
LicD family protein {ECO:0000313|EMBL:EDT14536.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
LicD family protein
L3_108_054G1_scaffold_188_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36741..38192
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU9_CLOPF
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT14516.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
polysaccharide biosynthesis protein
L3_108_054G1_scaffold_188_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38315..38821
DNA (507bp) protein (169aa)
Cell wall binding repeat/zinc carboxypeptidase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUV0_CLOPF
Cell wall binding repeat/zinc carboxypeptidase family protein {ECO:0000313|EMBL:EDT14507.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
cell wall binding repeat-containing protein/zinc carboxypeptidase family protein
Displaying 29 items

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