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L3_108_054G1_scaffold_200

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_200_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..4501)
DNA (4500bp) protein (1500aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG6X1-2 RepID=J8BRT6_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJQ54054.1}; TaxID=1053195 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG6X1-2.;"
glycosyl hydrolase 31 protein
L3_108_054G1_scaffold_200_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4644..6017)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003754432
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EKY28742.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_108_054G1_scaffold_200_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6424..10731
DNA (4308bp) protein (1436aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEW3_9CLOT
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EEH96811.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
beta-galactosidase
L3_108_054G1_scaffold_200_4
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10787..11146)
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Cohnella laeviribosi RepID=UPI00037284C7
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AET67452.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_108_054G1_scaffold_200_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11242..12588)
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Clostridium colicanis 209318 RepID=N9W9L2_9CLOT
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:CDM67573.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_108_054G1_scaffold_200_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12631..13011)
DNA (381bp) protein (127aa)
Glyoxalase I n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0P0_CLOBA
glyoxalase I
Lactoylglutathione lyase {ECO:0000313|EMBL:EES47844.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_108_054G1_scaffold_200_7
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13048..14229)
DNA (1182bp) protein (394aa)
Aminotransferase, class I/II n=3 Tax=Erysipelotrichaceae RepID=B0N5C2_9FIRM
Cystathionine beta-lyase {ECO:0000313|EMBL:KEO77476.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymyxa).;"
cystathionine beta-lyase
L3_108_054G1_scaffold_200_8
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14219..15052)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000375B20C
Uncharacterized protein {ECO:0000313|EMBL:KEO77475.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymyxa).;"
hydrogenase
L3_108_054G1_scaffold_200_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15241..16719
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72782.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_108_054G1_scaffold_200_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17218..18054
DNA (837bp) protein (279aa)
PHP domain protein {ECO:0000313|EMBL:ACD23406.1}; EC=3.1.3.- {ECO:0000313|EMBL:ACD23406.1};; Uncharacterized protein {ECO:0000313|EMBL:CDH91748.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
PHP domain protein n=2 Tax=Clostridium botulinum B RepID=B2TP73_CLOBB
metal-dependent phosphoesterase
L3_108_054G1_scaffold_200_11
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18235..19863
DNA (1629bp) protein (543aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EFF63463.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EFF63463.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
aspartate aminotransferase n=1 Tax=Bacillus sp. AP8 RepID=UPI0003050CB3
aspartate 4-decarboxylase
L3_108_054G1_scaffold_200_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20023..20268)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N388_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29962.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
bacteriophage holin family protein
L3_108_054G1_scaffold_200_13
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20340..21077)
DNA (738bp) protein (246aa)
ATPase components of various ABC-type transport systems contain duplicated ATPase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MP28_9FIRM
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETT53986.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
L3_108_054G1_scaffold_200_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21056..22747)
DNA (1692bp) protein (564aa)
UPI0003D60E7E related cluster n=1 Tax=unknown RepID=UPI0003D60E7E
ABC transporter related protein {ECO:0000313|EMBL:ETI92504.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
cbiO5; cobalt ABC transport system ATP-binding protein CbiO5
L3_108_054G1_scaffold_200_15
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22687..23565)
DNA (879bp) protein (293aa)
Cobalt transport protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZP1_9CLOT
cobalt transporter
Cobalt transporter {ECO:0000313|EMBL:AIQ72473.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
L3_108_054G1_scaffold_200_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23587..24303)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6LPP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB76067.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_108_054G1_scaffold_200_17
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24307..25833)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003657713
Uncharacterized protein {ECO:0000313|EMBL:CDF12524.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_108_054G1_scaffold_200_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26255..27640)
DNA (1386bp) protein (462aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
M18 family aminopeptidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWW8_CLOBA
putative M18 family aminopeptidase 1
L3_108_054G1_scaffold_200_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27721..28632)
DNA (912bp) protein (304aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
HPr kinase/phosphorylase n=1 Tax=Clostridium colicanis 209318 RepID=N9XUH2_9CLOT
hprK; HPr(Ser) kinase/phosphatase
L3_108_054G1_scaffold_200_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28646..28834)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035E17D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07653.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_108_054G1_scaffold_200_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29669..30064)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WKF4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84159.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_054G1_scaffold_200_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30083..30325)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25944.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_108_054G1_scaffold_200_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30465..31640)
DNA (1176bp) protein (392aa)
Metallo-beta-lactamase family protein/flavodoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CC84_9CLOT
Metallo-beta-lactamase family protein/flavodoxin {ECO:0000313|EMBL:EOR24821.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
metallo-beta-lactamase/flavodoxin
L3_108_054G1_scaffold_200_24
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31748..34030)
DNA (2283bp) protein (761aa)
helD1; helicase IV (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Helicase IV n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MRH8_9CLOT
L3_108_054G1_scaffold_200_25
unknown

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comp(34123..34251)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_108_054G1_scaffold_200_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34357..34953)
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium ultunense Esp RepID=M1ZEE5_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCQ96649.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
TetR family transcriptional regulator
L3_108_054G1_scaffold_200_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

35063..35188
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SET2_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCZ32484.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
EDD domain protein, DegV family
Displaying 27 items

View Taxonomy