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L3_108_054G1_scaffold_348

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_348_1
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..1037)
DNA (1035bp) protein (345aa)
elongation factor P n=1 Tax=Staphylococcus RepID=UPI00030937E7
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
fusA; elongation factor G
L3_108_054G1_scaffold_348_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(1159..1629)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=513 Tax=Staphylococcus RepID=RS7_STAA1
rpsG; ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_108_054G1_scaffold_348_3
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(1699..2112)
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=1 Tax=Staphylococcus RepID=UPI00031CA07F
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
30S ribosomal protein S12
L3_108_054G1_scaffold_348_4
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2202..2462)
DNA (261bp) protein (87aa)
50S ribosomal protein L7 n=1 Tax=Staphylococcus RepID=UPI0002D4FFA3
50S ribosomal protein L7A {ECO:0000313|EMBL:EUZ67712.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ribosomal protein L7Ae-like
L3_108_054G1_scaffold_348_5
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2610..6230)
DNA (3621bp) protein (1207aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Staphylococcus RepID=UPI0002DFFE35
rpoC; DNA-directed RNA polymerase beta' chain protein
L3_108_054G1_scaffold_348_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6393..9944)
DNA (3552bp) protein (1184aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=10 Tax=Staphylococcus hominis RepID=C2LYH8_STAHO
L3_108_054G1_scaffold_348_7
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10148..10756)
DNA (609bp) protein (203aa)
16S rRNA methyltransferase n=1 Tax=Staphylococcus hominis RepID=UPI00031BFAE8
Methyltransferase {ECO:0000313|EMBL:EUZ67709.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
methyltransferase small domain-containing protein
L3_108_054G1_scaffold_348_8
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(10928..11296)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Staphylococcus hominis VCU122 RepID=H3VLC8_STAHO
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
rplL; 50S ribosomal protein L7/L12
L3_108_054G1_scaffold_348_9
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11336..11836)
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=3 Tax=Staphylococcus hominis RepID=C2LYI1_STAHO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
rplJ; 50S ribosomal protein L10
L3_108_054G1_scaffold_348_10
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(12149..12844)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Staphylococcus RepID=UPI00030A64A3
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
rplA; 50S ribosomal protein L1
L3_108_054G1_scaffold_348_11
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(13051..13473)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=71 Tax=Staphylococcus RepID=RL11_STAEQ
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemolyticus (strain JCSC1435).;"
L3_108_054G1_scaffold_348_12
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13660..14208)
DNA (549bp) protein (183aa)
transcription antitermination protein NusG n=1 Tax=Staphylococcus RepID=UPI0003051C23
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_108_054G1_scaffold_348_13
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14226..14501)
DNA (276bp) protein (92aa)
preprotein translocase subunit SecE n=1 Tax=Staphylococcus RepID=UPI0002F28D06
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
secE; preprotein translocase subunit SecE
L3_108_054G1_scaffold_348_14
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14694..15284)
DNA (591bp) protein (197aa)
sigma factor n=1 Tax=Staphylococcus RepID=UPI000312862F
Uncharacterized protein {ECO:0000313|EMBL:EUZ67702.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
RNA polymerase factor sigma-70
L3_108_054G1_scaffold_348_15
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15352..15882)
DNA (531bp) protein (177aa)
YacP-like NYN domain protein n=2 Tax=Staphylococcus hominis RepID=H3VLD5_STAHO
Putative uncharacterized protein {ECO:0000313|EMBL:EFS19526.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
YacP-like NYN domain protein
L3_108_054G1_scaffold_348_16
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15879..16637)
DNA (759bp) protein (253aa)
RNA methyltransferase n=1 Tax=Staphylococcus hominis RepID=UPI0002F03DB1
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EUZ67700.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
yacO; TrmH family RNA methyltransferase
L3_108_054G1_scaffold_348_17
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16637..16939)
DNA (303bp) protein (101aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ribonuclease III n=1 Tax=Staphylococcus RepID=UPI0002EAA1EC
ribonuclease III
Displaying 17 items

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