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L3_108_054G1_scaffold_363

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_363_1
unknown

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2..91
DNA (90bp) protein (30aa)

This feature has no annotations

L3_108_054G1_scaffold_363_2
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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1397..1618
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KHY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46050.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
putative metal ion binding protein
L3_108_054G1_scaffold_363_3
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1783..3651
DNA (1869bp) protein (623aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DA54_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:CDD87519.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_108_054G1_scaffold_363_4
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3778..4938
DNA (1161bp) protein (387aa)
M20D family peptidase {ECO:0000313|EMBL:EGY80621.1}; EC=3.4.17.- {ECO:0000313|EMBL:EGY80621.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
M20D family peptidase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D1H2_9FIRM
amidohydrolase
L3_108_054G1_scaffold_363_5
unknown

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5031..5156
DNA (126bp) protein (42aa)

This feature has no annotations

L3_108_054G1_scaffold_363_6
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5268..5852
DNA (585bp) protein (195aa)
G-protein-signaling modulator 2 n=1 Tax=Microcystis sp. T1-4 RepID=I4IC02_9CHRO
G-protein-signaling modulator 2 {ECO:0000313|EMBL:CCI31826.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
response regulator aspartate phosphatase
L3_108_054G1_scaffold_363_7
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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6434..6730
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WZM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15909.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
methyl-accepting chemotaxis protein
L3_108_054G1_scaffold_363_8
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7501..8415)
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QJ89_9FIRM
L3_108_054G1_scaffold_363_9
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8438..8935)
DNA (498bp) protein (166aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
defA; DefA (EC:3.5.1.31)
Peptide deformylase n=2 Tax=unclassified Eubacteriaceae RepID=J6H3G0_9FIRM
L3_108_054G1_scaffold_363_10
unknown

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comp(8973..9209)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_108_054G1_scaffold_363_11
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9262..9969)
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WXZ3_9FIRM
deoD; purine nucleoside phosphorylase
L3_108_054G1_scaffold_363_12
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10164..10589)
DNA (426bp) protein (142aa)
Cytidine deaminase {ECO:0000313|EMBL:EJP25811.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EJP25811.1};; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
Cytidine deaminase n=1 Tax=Eubacterium sp. AS15 RepID=J4KB81_9FIRM
cytidine deaminase
L3_108_054G1_scaffold_363_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10912..12054)
DNA (1143bp) protein (381aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJX5_CLOSV
sensor histidine kinase IrlS
L3_108_054G1_scaffold_363_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12051..12728)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=B0NJX4_CLOSV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS05201.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
transcriptional regulator FeuP
L3_108_054G1_scaffold_363_15
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12937..13101
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HWA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO15977.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
hypothetical protein
L3_108_054G1_scaffold_363_16
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13094..14035
DNA (942bp) protein (314aa)
4Fe-4S binding domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y4Z4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ESL04038.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
iron-sulfur cluster-binding protein
L3_108_054G1_scaffold_363_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14049..14942
DNA (894bp) protein (298aa)
Redoxin family protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF08837.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
antioxidant, AhpC/TSA family
L3_108_054G1_scaffold_363_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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14957..15775
DNA (819bp) protein (273aa)
CAAX amino terminal protease family protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y8N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF08836.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
CAAX amino protease family protein
Displaying 18 items

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