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L3_108_054G1_scaffold_452

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_452_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..340
DNA (339bp) protein (113aa)
Integral membrane protein TerC n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLY9_VEIPT
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ACZ24396.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_108_054G1_scaffold_452_2
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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340..1824
DNA (1485bp) protein (495aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KME8_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFG25275.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
TrmA family RNA methyltransferase
L3_108_054G1_scaffold_452_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2154..2348
DNA (195bp) protein (65aa)
Putative AlpA family transcriptional regulator n=1 Tax=Ruminococcus torques CAG:61 RepID=R5R1H5_9FIRM
DNA binding domain%2C excisionase family {ECO:0000313|EMBL:CRH70999.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
DNA binding domain, excisionase family
L3_108_054G1_scaffold_452_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2369..3457
DNA (1089bp) protein (363aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Cytosine-specific methyltransferase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI11_9FIRM
Modification methylase ScrFIB
L3_108_054G1_scaffold_452_5
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3481..4638
DNA (1158bp) protein (386aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Cytosine-specific methyltransferase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI10_9FIRM
kpn2kIM; DNA-methyltransferase MKpn2kI
L3_108_054G1_scaffold_452_6
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4648..5115
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17524.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_108_054G1_scaffold_452_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5243..6052)
DNA (810bp) protein (270aa)
LlaMI restriction endonuclease n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI08_9FIRM
LlaMI restriction endonuclease {ECO:0000313|EMBL:EFV17523.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
scrFI; Type II restriction enzyme ScrFI
L3_108_054G1_scaffold_452_8
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

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comp(6065..7600)
DNA (1536bp) protein (512aa)
id=1859167 bin=GWD2_Clostridiales_32_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Tax=GWD2_Clostridiales_32_59_curated
L3_108_054G1_scaffold_452_9
Granulicatella elegans, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(7718..7963)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKS6_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW93679.1}; TaxID=626369 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella elegans ATCC 700633.;"
MutT/NUDIX family protein
L3_108_054G1_scaffold_452_10
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8081..8284)
DNA (204bp) protein (68aa)
XRE family transcriptional regulator n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WJI4_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:CCZ92642.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
XRE family transcriptional regulator
L3_108_054G1_scaffold_452_11
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8298..9386)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WA43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92641.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_108_054G1_scaffold_452_12
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9843..10409
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=J5AKU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJO50590.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
L3_108_054G1_scaffold_452_13
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10418..10972
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZY07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EUB21155.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
L3_108_054G1_scaffold_452_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11014..11652
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86723.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
L3_108_054G1_scaffold_452_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11669..12148
DNA (480bp) protein (160aa)
5-nitroimidazole resistance protein NimA n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KH92_9FIRM
5-nitroimidazole resistance protein NimA {ECO:0000313|EMBL:EFG23489.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Predicted flavin-nucleotide-binding protein
L3_108_054G1_scaffold_452_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12547..12627
DNA (81bp) protein (27aa)
PF14137 domain protein n=1 Tax=Veillonella sp. ACP1 RepID=J5AQZ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFL57592.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
Displaying 16 items

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