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L3_108_054G1_scaffold_272

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_054G1_scaffold_272_1
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..154
DNA (153bp) protein (51aa)
50S ribosomal protein L27 n=2 Tax=Veillonella RepID=K9DPZ4_9FIRM
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L3_108_054G1_scaffold_272_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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370..1026
DNA (657bp) protein (219aa)
UPI0003D5F1B3 related cluster n=1 Tax=unknown RepID=UPI0003D5F1B3
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETJ13945.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
ABC transporter ATP-binding protein
L3_108_054G1_scaffold_272_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1023..1787
DNA (765bp) protein (255aa)
UPI0003D6497D related cluster n=1 Tax=unknown RepID=UPI0003D6497D
ABC transporter, permease protein {ECO:0000313|EMBL:ETJ13946.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
membrane protein
L3_108_054G1_scaffold_272_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2042..3496
DNA (1455bp) protein (485aa)
Putative ThiH protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIK1_9FIRM
Putative ThiH protein {ECO:0000313|EMBL:EFG23948.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
biotin and thiamin synthesis associated protein
L3_108_054G1_scaffold_272_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3692..5674
DNA (1983bp) protein (661aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EEP65727.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEP65727.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPI9_9FIRM
single-stranded-DNA-specific exonuclease RecJ
L3_108_054G1_scaffold_272_6
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5686..7926
DNA (2241bp) protein (747aa)
UPI0003D698FE related cluster n=1 Tax=unknown RepID=UPI0003D698FE
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ETJ15233.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
(p)ppGpp synthetase I SpoT/RelA
L3_108_054G1_scaffold_272_7
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7926..8561
DNA (636bp) protein (212aa)
UPI0003D61757 related cluster n=1 Tax=unknown RepID=UPI0003D61757
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ETJ15232.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
beta-lactamase
L3_108_054G1_scaffold_272_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8602..9093
DNA (492bp) protein (164aa)
UPI0003D678AA related cluster n=1 Tax=unknown RepID=UPI0003D678AA
Ferric uptake regulation protein {ECO:0000313|EMBL:ETJ15231.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
Fur family ferric uptake regulator
L3_108_054G1_scaffold_272_9
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9086..10513
DNA (1428bp) protein (476aa)
UPI0003D5B0EE related cluster n=1 Tax=unknown RepID=UPI0003D5B0EE
Radical SAM protein {ECO:0000313|EMBL:ETJ15230.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
radical SAM protein
L3_108_054G1_scaffold_272_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10513..11784
DNA (1272bp) protein (424aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Histidine--tRNA ligase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPJ4_9FIRM
histidyl-tRNA synthetase
L3_108_054G1_scaffold_272_11
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11882..13501
DNA (1620bp) protein (540aa)
UPI0003D64731 related cluster n=2 Tax=unknown RepID=UPI0003D64731
Aspartate-tRNA ligase {ECO:0000313|EMBL:ETJ15228.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
aspartyl-tRNA synthetase
L3_108_054G1_scaffold_272_12
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13959..15260
DNA (1302bp) protein (434aa)
UPI0003D59FDD related cluster n=1 Tax=unknown RepID=UPI0003D59FDD
Recombination factor protein RarA {ECO:0000313|EMBL:ETJ15227.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
ATPase AAA
L3_108_054G1_scaffold_272_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15343..18087
DNA (2745bp) protein (915aa)
FtsK/SpoIIIE family protein n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FPJ7_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EEP65735.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
cell division protein FtsK
L3_108_054G1_scaffold_272_14
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18136..18588
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15224.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
XRE family transcriptional regulator
L3_108_054G1_scaffold_272_15
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18592..20589
DNA (1998bp) protein (666aa)
UPI0003D61100 related cluster n=1 Tax=unknown RepID=UPI0003D61100
UPF0313 protein Q620_VSAC01046G0004 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
radical SAM protein
L3_108_054G1_scaffold_272_16
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20652..21689
DNA (1038bp) protein (346aa)
UPI0003D680DD related cluster n=1 Tax=unknown RepID=UPI0003D680DD
Uncharacterized protein {ECO:0000313|EMBL:ETJ15222.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
extracellular solute-binding protein
L3_108_054G1_scaffold_272_17
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21741..23102
DNA (1362bp) protein (454aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D69650 related cluster n=1 Tax=unknown RepID=UPI0003D69650
MiaB-like tRNA modifying enzyme YliG
L3_108_054G1_scaffold_272_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23140..24387
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK2_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
competence/damage-inducible protein CinA
L3_108_054G1_scaffold_272_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


24392..25432
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK3_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
recA protein
L3_108_054G1_scaffold_272_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25435..25878
DNA (444bp) protein (148aa)
Regulatory protein RecX n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK4_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
regulatory protein RecX
L3_108_054G1_scaffold_272_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26093..27598
DNA (1506bp) protein (502aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Ribonuclease Y n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK5_9FIRM
RNA binding metal dependent phosphohydrolase
L3_108_054G1_scaffold_272_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27833..29626
DNA (1794bp) protein (598aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
DNA primase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK6_9FIRM
DNA primase
L3_108_054G1_scaffold_272_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29650..30813
DNA (1164bp) protein (388aa)
RNA polymerase sigma factor SigA n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPK7_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_108_054G1_scaffold_272_24
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31022..31381
DNA (360bp) protein (120aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=5 Tax=Veillonella RepID=C4FPK8_9FIRM
6-pyruvoyl-tetrahydropterin synthase
L3_108_054G1_scaffold_272_25
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31368..32111
DNA (744bp) protein (248aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D5C55C related cluster n=1 Tax=unknown RepID=UPI0003D5C55C
radical SAM protein
L3_108_054G1_scaffold_272_26
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32200..32763
DNA (564bp) protein (188aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D69066 related cluster n=1 Tax=unknown RepID=UPI0003D69066
GTP cyclohydrolase I
L3_108_054G1_scaffold_272_27
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32976..33713
DNA (738bp) protein (246aa)
UPI0003D68F05 related cluster n=1 Tax=unknown RepID=UPI0003D68F05
Uncharacterized protein {ECO:0000313|EMBL:ETJ14158.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
L3_108_054G1_scaffold_272_28
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33719..34822
DNA (1104bp) protein (368aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D5DC98 related cluster n=1 Tax=unknown RepID=UPI0003D5DC98
hypothetical protein
Displaying 28 items

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