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L3_108_077G1_scaffold_761

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_077G1_scaffold_761_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..274
DNA (273bp) protein (91aa)
Sodium/glutamate symporter n=1 Tax=Escherichia coli 2733950 RepID=N3IVD8_ECOLX
gltS; Sodium/glutamate symporter
Sodium/glutamate symporter carrier protein {ECO:0000313|EMBL:EOW09725.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L3_108_077G1_scaffold_761_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308..2017)
DNA (1710bp) protein (570aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CKH01602.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CKH01602.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
ATP-dependent DNA helicase RecG n=98 Tax=Escherichia RepID=A1AHI3_ECOK1
L3_108_077G1_scaffold_761_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2007..2294)
DNA (288bp) protein (96aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Escherichia coli N1 RepID=K3KEY1_ECOLX
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EKJ81118.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_108_077G1_scaffold_761_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2300..2989)
DNA (690bp) protein (230aa)
RNA methyltransferase, TrmH family n=12 Tax=Escherichia RepID=C1HSS1_9ESCH
spoU; tRNA guanosine-2'-O-methyltransferase
tRNA guanosine-2'-O-methyltransferase (TRNA [Gm18]methyltransferase) {ECO:0000313|EMBL:EGI19377.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_108_077G1_scaffold_761_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2996..4675)
DNA (1680bp) protein (560aa)
Bifunctional (P)ppGpp synthase/hydrolase SpoT n=3 Tax=Escherichia coli RepID=N2ZHS5_ECOLX
bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:EOU62831.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_108_077G1_scaffold_761_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4918..5193)
DNA (276bp) protein (92aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
DNA-directed RNA polymerase subunit omega n=2211 Tax=Bacteria RepID=RPOZ_CITK8
L3_108_077G1_scaffold_761_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5248..5871)
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Guanylate kinase n=1157 Tax=Enterobacteriaceae RepID=KGUA_ECOL5
gmk; guanylate kinase
L3_108_077G1_scaffold_761_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6129..6635
DNA (507bp) protein (169aa)
ligB; NAD(+)-dependent DNA ligase LigB (EC:6.5.1.2)
DNA ligase B n=1 Tax=Escherichia coli KTE57 RepID=L3M6J2_ECOLX
DNA ligase B {ECO:0000313|EMBL:EOW93601.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_108_077G1_scaffold_761_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6619..7041
DNA (423bp) protein (141aa)
ligB; NAD-dependent DNA ligase LigB (EC:6.5.1.2)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
DNA ligase B n=2 Tax=Escherichia coli RepID=T7R1U4_ECOLX
L3_108_077G1_scaffold_761_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7046..7531
DNA (486bp) protein (162aa)
ligB; NAD-dependent DNA ligase LigB (EC:6.5.1.2)
DNA ligase B n=1 Tax=Escherichia coli HVH 12 (4-7653042) RepID=V4C9W9_ECOLX
DNA ligase B {ECO:0000313|EMBL:ELJ67150.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_108_077G1_scaffold_761_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..8145)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli M863 RepID=E9YW54_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ83007.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
L3_108_077G1_scaffold_761_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8437..9261)
DNA (825bp) protein (275aa)
DNA-damage-inducible protein D n=348 Tax=Escherichia RepID=E2QH00_ECOLX
dinD; DNA-damage-inducible protein D
BRO family, N-terminal domain protein {ECO:0000313|EMBL:KEO27446.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L3_108_077G1_scaffold_761_13
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9644..9760
DNA (117bp) protein (39aa)
Uncharacterized protein n=19 Tax=Escherichia coli RepID=I2PGQ2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU46677.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_108_077G1_scaffold_761_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9965..10252)
DNA (288bp) protein (96aa)
Transcriptional activator PerC n=52 Tax=Escherichia RepID=C1HSR4_9ESCH
Transcriptional regulator {ECO:0000313|EMBL:KHH04705.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative prophage regulatory protein
L3_108_077G1_scaffold_761_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..10955
DNA (444bp) protein (148aa)
Uncharacterized protein n=21 Tax=Escherichia RepID=C1HSR3_9ESCH
Uncharacterized protein {ECO:0000313|EMBL:EFK03590.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
hypothetical protein
L3_108_077G1_scaffold_761_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10972..11349)
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L4G6H7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO83877.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_077G1_scaffold_761_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11353..11835)
DNA (483bp) protein (161aa)
Uncharacterized protein n=31 Tax=Escherichia RepID=I2PGP8_ECOLX
Toxin {ECO:0000313|EMBL:EXX82939.1}; TaxID=1348563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Namur str. 05-2929.;"
hypothetical protein
L3_108_077G1_scaffold_761_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12747..13142
DNA (396bp) protein (132aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=E5ZZG0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AKF19306.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_108_077G1_scaffold_761_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13162..15279)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=14 Tax=Escherichia coli RepID=E5ZZG1_ECOLX
prophage protein
Prophage protein {ECO:0000313|EMBL:CBI99836.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_108_077G1_scaffold_761_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15264..16634)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Escherichia coli MS 110-3 RepID=E5ZZG2_ECOLX
Putative dNA transfer protein gp20 {ECO:0000313|EMBL:ENB25069.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
gp; DNA transfer protein gp20
L3_108_077G1_scaffold_761_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16787..16900)
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli UMNK88 RepID=F4M7W7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE58960.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_108_077G1_scaffold_761_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17209..17946)
DNA (738bp) protein (246aa)
Uncharacterized protein n=38 Tax=Escherichia RepID=C1HSQ5_9ESCH
putative prophage protein
Putative prophage protein {ECO:0000313|EMBL:CBI99831.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_108_077G1_scaffold_761_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17936..18166)
DNA (231bp) protein (77aa)
Uncharacterized protein n=44 Tax=Escherichia RepID=C1HSQ4_9ESCH
putative prophage protein
Uncharacterized protein {ECO:0000313|EMBL:EFK19349.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_108_077G1_scaffold_761_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18343..20694)
DNA (2352bp) protein (784aa)
Zinc-binding domain of primase-helicase n=22 Tax=Escherichia RepID=C1HSQ3_9ESCH
Zinc-binding domain of primase-helicase {ECO:0000313|EMBL:EIG80226.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
putative primase
L3_108_077G1_scaffold_761_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20707..21309)
DNA (603bp) protein (201aa)
Uncharacterized protein n=22 Tax=Escherichia RepID=C1HSQ2_9ESCH
putative prophage protein
Prophage protein {ECO:0000313|EMBL:AKF19298.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_077G1_scaffold_761_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21302..21523)
DNA (222bp) protein (74aa)
Uncharacterized protein n=183 Tax=Enterobacteriaceae RepID=B2TTW7_SHIB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQQ16120.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_108_077G1_scaffold_761_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21520..21783)
DNA (264bp) protein (88aa)
Uncharacterized protein n=22 Tax=Escherichia RepID=C1HSQ0_9ESCH
putative prophage protein
Nicotinic acetylcholine receptor subunit beta {ECO:0000313|EMBL:AKF19296.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_108_077G1_scaffold_761_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21780..21974)
DNA (195bp) protein (65aa)
Uncharacterized protein n=45 Tax=Enterobacteriaceae RepID=C1HSP9_9ESCH
putative prophage protein
Uncharacterized protein {ECO:0000313|EMBL:EHU07925.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_108_077G1_scaffold_761_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21967..23034)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=21 Tax=Escherichia RepID=E5ZZH3_ECOLX
putative prophage protein
Putative prophage protein {ECO:0000313|EMBL:CBI99825.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_108_077G1_scaffold_761_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23031..23210)
DNA (180bp) protein (60aa)
Uncharacterized protein n=22 Tax=Escherichia RepID=C1HSP7_9ESCH
Uncharacterized protein {ECO:0000313|EMBL:EOW10779.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
putative prophage protein
Displaying items 1-30 of 52 in total

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