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L3_108_103G1_scaffold_1136

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_1136_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Alanine--tRNA ligase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9R5_BIFBA
alanyl-tRNA synthetase
L3_108_103G1_scaffold_1136_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(995..1231)
DNA (237bp) protein (79aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSE4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98063.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_108_103G1_scaffold_1136_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1231..1629)
DNA (399bp) protein (133aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DSE5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ55076.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_108_103G1_scaffold_1136_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1831..2559)
DNA (729bp) protein (243aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5W7_BIFLO
hypothetical protein
Histidine phosphatase superfamily (Branch 1) {ECO:0000313|EMBL:EIJ28471.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_108_103G1_scaffold_1136_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2843..4648
DNA (1806bp) protein (602aa)
Acyltransferase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I305_BIFLN
Acyltransferase {ECO:0000313|EMBL:KFI69971.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_108_103G1_scaffold_1136_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4739..5365)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=20 Tax=Bifidobacterium RepID=RS4_BIFLD
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_108_103G1_scaffold_1136_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5564..6556)
DNA (993bp) protein (331aa)
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:KFI69969.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI69969.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTW9_BIFLJ
ABC transporter ATP-binding protein
L3_108_103G1_scaffold_1136_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6558..7775)
DNA (1218bp) protein (406aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB3_BIFLS
ABC transporter permease {ECO:0000313|EMBL:KEY31971.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_108_103G1_scaffold_1136_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7866..8264)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B7GSB4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31970.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_108_103G1_scaffold_1136_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8409..11117)
DNA (2709bp) protein (903aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTL7_BIFLN
ATP-dependent DNA helicase PcrA
L3_108_103G1_scaffold_1136_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11204..11785
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Xanthine phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=XPT_BIFLS
xanthine phosphoribosyltransferase
L3_108_103G1_scaffold_1136_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11836..13200
DNA (1365bp) protein (455aa)
Xanthine/uracil transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSB7_BIFLS
Uracil permease {ECO:0000313|EMBL:KEY31967.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
xanthine/uracil/vitamin C permease
Displaying 12 items

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