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L3_108_103G1_scaffold_1376

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_1376_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(17..979)
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L-lactate dehydrogenase n=2 Tax=Bifidobacterium RepID=D6ZV55_BIFLJ
L-lactate dehydrogenase
L3_108_103G1_scaffold_1376_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1161..2603)
DNA (1443bp) protein (481aa)
GTPase HflX n=2 Tax=Bifidobacterium RepID=D6ZV56_BIFLJ
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
small GTP-binding protein
L3_108_103G1_scaffold_1376_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2762..3418
DNA (657bp) protein (219aa)
Methyltransferase small {ECO:0000313|EMBL:KFI73450.1}; EC=2.1.1.172 {ECO:0000313|EMBL:KFI73450.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Methyltransferase small n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV57_BIFLJ
MFS transporter
L3_108_103G1_scaffold_1376_4
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3408..7436
DNA (4029bp) protein (1343aa)
HrpA-like helicase {ECO:0000313|EMBL:KFI55489.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KFI55489.1};; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
ATP-dependent HrpA-like helicase n=1 Tax=Gardnerella vaginalis 5-1 RepID=D6T250_GARVA
hrpA; ATP-dependent helicase HrpA
L3_108_103G1_scaffold_1376_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7433..8404
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV59_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI73452.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_108_103G1_scaffold_1376_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8515..9072)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI73453.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_108_103G1_scaffold_1376_7
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9443..10348)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I999_CLOCE
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:KFI85147.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
hypothetical protein
L3_108_103G1_scaffold_1376_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10428..11150)
DNA (723bp) protein (241aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV65_BIFLJ
Major facilitator superfamily protein {ECO:0000313|EMBL:KFI73454.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
arabinose transporter
L3_108_103G1_scaffold_1376_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11327..12664)
DNA (1338bp) protein (446aa)
Glutamine synthetase, type I n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV66_BIFLJ
glutamine synthetase, type I
Glutamine synthetase, type I {ECO:0000313|EMBL:ADH00773.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_108_103G1_scaffold_1376_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12801..14246
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV67_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI73456.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_108_103G1_scaffold_1376_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14350..15075)
DNA (726bp) protein (242aa)
phosphoribosyl isomerase A (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Bifidobacterium longum RepID=HIS4_BIFLS
L3_108_103G1_scaffold_1376_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15145..15792)
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV69_BIFLJ
hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit
L3_108_103G1_scaffold_1376_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15826..16278)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV70_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00776.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_108_103G1_scaffold_1376_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16269..16538)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV70_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI73459.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_108_103G1_scaffold_1376_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16538..17137)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV71_BIFLJ
imidazoleglycerol-phosphate dehydratase
L3_108_103G1_scaffold_1376_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17223..18383)
DNA (1161bp) protein (387aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Histidinol-phosphate aminotransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV72_BIFLJ
L3_108_103G1_scaffold_1376_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18380..19762)
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Histidinol dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCP0_BIFLN
histidinol dehydrogenase
L3_108_103G1_scaffold_1376_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19879..20172)
DNA (294bp) protein (98aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Acylphosphatase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ45_BIFLS
acylphosphatase
L3_108_103G1_scaffold_1376_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20185..21651)
DNA (1467bp) protein (489aa)
Carbohydrate kinase, FGGY n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV74_BIFLJ
carbohydrate kinase, FGGY
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ADH00780.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_108_103G1_scaffold_1376_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21960..22787
DNA (828bp) protein (276aa)
2,5-didehydrogluconate reductase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV75_BIFLJ
2,5-didehydrogluconate reductase
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ADH00781.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Displaying 20 items

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