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L3_108_103G1_scaffold_2154

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_2154_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..750)
DNA (750bp) protein (250aa)
Methionine--tRNA ligase {ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|SAAS:SAAS00001323};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Methionine--tRNA ligase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MXU1_9BIFI
Methionyl-tRNA synthetase
L3_108_103G1_scaffold_2154_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1190..1816
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP87_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53482.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_108_103G1_scaffold_2154_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1957..2184
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP88_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53483.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_108_103G1_scaffold_2154_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2211..3266)
DNA (1056bp) protein (352aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP89_BIFLS
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L3_108_103G1_scaffold_2154_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3654..4805)
DNA (1152bp) protein (384aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWW5_BIFLJ
sugar (glycoside-pentoside-hexuronide) transporter
Sugar (Glycoside-pentoside-hexuronide) transporter {ECO:0000313|EMBL:KFI67105.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_108_103G1_scaffold_2154_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4951..6006
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWW6_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH01371.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_108_103G1_scaffold_2154_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6145..7974)
DNA (1830bp) protein (610aa)
ABC transporter transmembrane region n=4 Tax=Bifidobacterium longum RepID=I3BAU9_BIFLN
ABC transporter permease
ABC transporter transmembrane region {ECO:0000313|EMBL:EIJ32503.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_108_103G1_scaffold_2154_8
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8190..10061)
DNA (1872bp) protein (624aa)
MdlB2 n=2 Tax=Bifidobacterium RepID=E4R247_BIFLM
ABC transporter {ECO:0000313|EMBL:EFV37295.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
mdlB2; mdlb2
L3_108_103G1_scaffold_2154_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10312..10923)
DNA (612bp) protein (204aa)
Transcriptional regulator, MarR family n=4 Tax=Bifidobacterium RepID=D6ZWW9_BIFLJ
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADH01375.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_108_103G1_scaffold_2154_10
unknown

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comp(10933..11121)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 10 items

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