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L3_108_103G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_152_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1610)
DNA (1608bp) protein (536aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ANC3_9FIRM
L3_108_103G1_scaffold_152_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1623..2105)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=4 Tax=Lachnospiraceae RepID=E9RXE5_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
transcription elongation factor GreA
L3_108_103G1_scaffold_152_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2222..3199)
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ANC5_9FIRM
tRNA-U20-dihydrouridine synthase
L3_108_103G1_scaffold_152_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3218..3985)
DNA (768bp) protein (256aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Type III pantothenate kinase n=4 Tax=Lachnospiraceae RepID=E9RXE7_9FIRM
hypothetical protein
L3_108_103G1_scaffold_152_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3985..4314)
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74107.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_108_103G1_scaffold_152_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4349..5332)
DNA (984bp) protein (328aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XV62_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_108_103G1_scaffold_152_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5335..6324)
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ANC9_9FIRM
L3_108_103G1_scaffold_152_8
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6326..7426)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AND0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89817.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
patatin
L3_108_103G1_scaffold_152_9
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7520..8476)
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74111.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_108_103G1_scaffold_152_10
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8705..9496)
DNA (792bp) protein (264aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62628.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L3_108_103G1_scaffold_152_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9498..10649)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74113.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
2-hydroxyacyl-CoA dehydratase subunit beta
L3_108_103G1_scaffold_152_12
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10863..11864)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y0S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55930.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Cell Wall Hydrolase./Bacterial SH3 domain.
L3_108_103G1_scaffold_152_13
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12178..12966)
DNA (789bp) protein (263aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YEK4_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EPD62631.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
rRNA methylase, putative, group 3
L3_108_103G1_scaffold_152_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12969..13619)
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RXF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89823.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
K+ transport systems, NAD-binding component
L3_108_103G1_scaffold_152_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13634..15010)
DNA (1377bp) protein (459aa)
TrkH family potassium uptake protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YER7_9FIRM
TrkH family potassium uptake protein {ECO:0000313|EMBL:EPD55927.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Trk-type K+ transport systems, membrane components
L3_108_103G1_scaffold_152_16
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15170..15859)
DNA (690bp) protein (230aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74118.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_103G1_scaffold_152_17
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15852..17348)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y0S2_9FIRM
hypothetical protein
L3_108_103G1_scaffold_152_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17560..18747)
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=2 Tax=Lachnospiraceae RepID=F3ANE0_9FIRM
L3_108_103G1_scaffold_152_19
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19073..20434)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XUA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55923.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
carbohydrate uptake ABC transporter substrate-binding protein
L3_108_103G1_scaffold_152_20
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20460..21287)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=S2YEL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62641.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
carbohydrate uptake ABC transporter permease
L3_108_103G1_scaffold_152_21
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21284..22177)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74126.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
carbohydrate uptake ABC transporter permease
L3_108_103G1_scaffold_152_22
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22177..23238)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y0R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55920.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
carbohydrate ABC transporter ATP-binding protein
L3_108_103G1_scaffold_152_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23228..23782)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YVU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55919.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_108_103G1_scaffold_152_24
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24047..25339)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XUA3_9FIRM
L3_108_103G1_scaffold_152_25
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25839..26279)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YEQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55917.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_108_103G1_scaffold_152_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26413..26808)
DNA (396bp) protein (132aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XV42_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_108_103G1_scaffold_152_27
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26821..28212)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=3 Tax=Lachnospiraceae RepID=E9RXH3_9FIRM
L3_108_103G1_scaffold_152_28
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28241..29113)
DNA (873bp) protein (291aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=4 Tax=Lachnospiraceae RepID=E9RXH4_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_108_103G1_scaffold_152_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29155..30657)
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=4 Tax=Lachnospiraceae RepID=E9RXH5_9FIRM
L3_108_103G1_scaffold_152_30
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30692..31240)
DNA (549bp) protein (183aa)
ATP synthase F1 subcomplex delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Lachnospiraceae RepID=E9RXH6_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Displaying items 1-30 of 91 in total

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