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L3_108_103G1_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_172_1
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..1941)
DNA (1941bp) protein (647aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG49_9ACTN
Putative 2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:EJU34899.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
CoA-substrate-specific enzyme activase
L3_108_103G1_scaffold_172_2
unknown

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comp(1977..2819)
DNA (843bp) protein (281aa)

This feature has no annotations

L3_108_103G1_scaffold_172_3
unknown

Not on your lists

comp(2829..3056)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_108_103G1_scaffold_172_4
Corynebacterium urealyticum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3169..3363)
DNA (195bp) protein (65aa)
Putative Fe-S oxidoreductase n=1 Tax=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) RepID=B1VHX6_CORU7
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:CAQ05776.1}; TaxID=504474 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109).;"
L3_108_103G1_scaffold_172_5
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3439..4746)
DNA (1308bp) protein (436aa)
Sugar phosphate permease n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB3_9ACTN
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBL05010.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_6
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4885..5223)
DNA (339bp) protein (113aa)
Sugar phosphate permease n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB3_9ACTN
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBL05010.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5223..7439)
DNA (2217bp) protein (739aa)
Anaerobic dehydrogenases, typically selenocysteine-containing (EC:1.2.7.-)
Anaerobic dehydrogenases, typically selenocysteine-containing {ECO:0000313|EMBL:CBL05011.1}; EC=1.2.7.- {ECO:0000313|EMBL:CBL05011.1};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Anaerobic dehydrogenases, typically selenocysteine-containing n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB4_9ACTN
L3_108_103G1_scaffold_172_8
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7530..8780)
DNA (1251bp) protein (417aa)
Sugar phosphate permease n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB5_9ACTN
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBL05012.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_9
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9324..10271
DNA (948bp) protein (316aa)
Transcriptional regulator n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB6_9ACTN
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL05013.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10369..11013)
DNA (645bp) protein (215aa)
High molecular weight rubredoxin n=1 Tax=Clostridium difficile F501 RepID=T4BA21_CLODI
High molecular weight rubredoxin {ECO:0000313|EMBL:EQI06902.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
flavin reductase domain-containing FMN-binding protein
L3_108_103G1_scaffold_172_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11129..11971)
DNA (843bp) protein (281aa)
NTPase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BGP1_CLODI
NTPase family protein {ECO:0000313|EMBL:EQI06909.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_108_103G1_scaffold_172_12
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12125..13018
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YW66_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83719.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein
L3_108_103G1_scaffold_172_13
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13523..14500
DNA (978bp) protein (326aa)
Transport system permease protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WPK3_EGGLE
transport system permease
Uncharacterized protein {ECO:0000313|EMBL:KGI71329.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_108_103G1_scaffold_172_14
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14497..15279
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components {ECO:0000313|EMBL:CBL05014.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBL05014.1};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB7_9ACTN
L3_108_103G1_scaffold_172_15
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15316..16455
DNA (1140bp) protein (380aa)
Periplasmic binding protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WPK1_EGGLE
periplasmic binding protein
Uncharacterized protein {ECO:0000313|EMBL:KGI71331.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_108_103G1_scaffold_172_16
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(16574..17053)
DNA (480bp) protein (160aa)
LSU ribosomal protein L31P n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB8_9ACTN
LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|SAAS:SAAS00004482}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17188..18096)
DNA (909bp) protein (303aa)
Rhamnulose-1-phosphate aldolase n=1 Tax=Clostridium difficile F501 RepID=T4BD25_CLODI
Putative rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EGC88744.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Rhamnulose-1-phosphate aldolase
L3_108_103G1_scaffold_172_18
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18192..19649)
DNA (1458bp) protein (486aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Pyruvate kinase n=2 Tax=Bacteria PF8_9ACTN">RepID=F0HPF8_9ACTN
pyruvate kinase
L3_108_103G1_scaffold_172_19
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19830..20210)
DNA (381bp) protein (127aa)
Desulfoferrodoxin n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBB9_9ACTN
Desulfoferrodoxin
Desulfoferrodoxin {ECO:0000313|EMBL:CBL05016.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_20
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20305..21144)
DNA (840bp) protein (280aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBC0_9ACTN
L3_108_103G1_scaffold_172_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21240..21458)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WPJ4_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI71338.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_108_103G1_scaffold_172_22
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21532..22122)
DNA (591bp) protein (197aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Glutamine amidotransferase subunit PdxT n=3 Tax=Eggerthella RepID=C8WPJ3_EGGLE
SNO glutamine amidotransferase
L3_108_103G1_scaffold_172_23
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22132..23022)
DNA (891bp) protein (297aa)
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBC1_9ACTN
L3_108_103G1_scaffold_172_24
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23173..23463)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBC2_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05019.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_25
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23481..23717)
DNA (237bp) protein (79aa)
Thioredoxin-like proteins and domains n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBC3_9ACTN
Thioredoxin-like proteins and domains
Thioredoxin-like proteins and domains {ECO:0000313|EMBL:CBL05020.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_108_103G1_scaffold_172_26
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23866..25362)
DNA (1497bp) protein (499aa)
Cell envelope-related transcriptional attenuator n=3 Tax=Eggerthella RepID=C8WPI9_EGGLE
cell envelope-related transcriptional attenuator
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EGC88819.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_108_103G1_scaffold_172_27
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25375..26664)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBC5_9ACTN
L3_108_103G1_scaffold_172_28
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26839..27705)
DNA (867bp) protein (289aa)
Elongation factor Ts n=2 Tax=Eggerthella RepID=E5X6J3_9ACTN
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_108_103G1_scaffold_172_29
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(27846..28667)
DNA (822bp) protein (274aa)
30S ribosomal protein S2 n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7V0D0_EEGSY
RpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L3_108_103G1_scaffold_172_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28931..32449)
DNA (3519bp) protein (1173aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Clostridium difficile F501 RepID=T4BH67_CLODI
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EQI08595.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
cysteine ABC transporter permease/ATP-binding protein CydC
Displaying items 1-30 of 61 in total

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