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L3_108_103G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_196_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1107)
DNA (1107bp) protein (369aa)
Putative surface anchored protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1D7_CLOPF
Putative surface anchored protein {ECO:0000313|EMBL:EDT23863.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
cpa; fibronectin binding protein I Cpa
L3_108_103G1_scaffold_196_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1733..2449
DNA (717bp) protein (239aa)
Sortase n=2 Tax=Clostridium perfringens RepID=B1R776_CLOPF
Sortase {ECO:0000313|EMBL:EDT23900.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sortase A, LPXTG specific
L3_108_103G1_scaffold_196_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2737..3063
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSM6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15508.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_103G1_scaffold_196_4
unknown

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3239..3436
DNA (198bp) protein (66aa)

This feature has no annotations

L3_108_103G1_scaffold_196_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3533..4549
DNA (1017bp) protein (339aa)
C4-dicarboxylate transporter family protein n=3 Tax=Clostridium perfringens RepID=H7CRS3_CLOPF
C4-dicarboxylate transporter family protein {ECO:0000313|EMBL:EDT15480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
C4-dicarboxylate transporter family protein
L3_108_103G1_scaffold_196_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5063..6082
DNA (1020bp) protein (340aa)
UPF0324 membrane protein n=3 Tax=Clostridium perfringens RepID=H1CW77_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15453.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_103G1_scaffold_196_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6283..6435
DNA (153bp) protein (51aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XP35_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27336.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_108_103G1_scaffold_196_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6656..7549)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP34_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79837.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_103G1_scaffold_196_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7937..9175
DNA (1239bp) protein (413aa)
Putative competence-damage inducible protein n=5 Tax=Clostridium perfringens RepID=CINA_CLOPE
cinA; competence damage-inducible protein A
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_108_103G1_scaffold_196_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9825..10751
DNA (927bp) protein (309aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEK3_CLOPF
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDS81757.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
CAAX amino terminal protease
L3_108_103G1_scaffold_196_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10944..11213)
DNA (270bp) protein (90aa)
HesB-like domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWN2_CLOPS
HesB family selenoprotein
HesB-like domain protein {ECO:0000313|EMBL:ABG85499.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_108_103G1_scaffold_196_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11584..12171
DNA (588bp) protein (196aa)
Rubrerythrin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=RUBY_CLOPE
rubY; rubrerythrin
Rubrerythrin; Short=Rr;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_103G1_scaffold_196_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12324..12869)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1C6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15479.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_103G1_scaffold_196_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13270..13395
DNA (126bp) protein (42aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRT3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15451.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_108_103G1_scaffold_196_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13660..15216
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS61_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15486.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter
L3_108_103G1_scaffold_196_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15403..15609)
DNA (207bp) protein (69aa)
Transcription regulator, Cro/CI family-related protein n=3 Tax=Clostridium perfringens RepID=B1BS60_CLOPF
Transcription regulator, Cro/CI family-related protein {ECO:0000313|EMBL:EDT72411.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_108_103G1_scaffold_196_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15630..16118)
DNA (489bp) protein (163aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1BS59_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT72434.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_108_103G1_scaffold_196_18
Bacillus sp. B14905, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(16171..16389)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3I9L8_9BACI
group-specific protein
Uncharacterized protein {ECO:0000313|EMBL:EAZ85607.1}; TaxID=388400 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B14905.;"
L3_108_103G1_scaffold_196_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16763..17221)
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BS57_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15472.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_108_103G1_scaffold_196_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17391..17807
DNA (417bp) protein (139aa)
Putative transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS56_CLOPF
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT15448.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MarR family transcriptional regulator
L3_108_103G1_scaffold_196_21
unknown

Not on your lists

17899..17994
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW61_CLOPF
L3_108_103G1_scaffold_196_22
unknown

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18142..18897
DNA (756bp) protein (252aa)

This feature has no annotations

L3_108_103G1_scaffold_196_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18931..19092)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQV5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79685.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_108_103G1_scaffold_196_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19202..19777
DNA (576bp) protein (192aa)
BRO domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKI4_CLOPF
BRO domain protein {ECO:0000313|EMBL:EDS79664.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
BRO domain-containing protein
L3_108_103G1_scaffold_196_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20565..21410
DNA (846bp) protein (282aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRU3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18583.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_103G1_scaffold_196_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21439..22464
DNA (1026bp) protein (342aa)
2-keto-3-deoxygluconate kinase n=6 Tax=Clostridium perfringens RepID=Q8XP20_CLOPE
2-keto-3-deoxygluconate kinase
Putative gluconate kinase {ECO:0000313|EMBL:CAD12655.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
L3_108_103G1_scaffold_196_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22530..24329
DNA (1800bp) protein (600aa)
Beta-glucuronidase {ECO:0000313|EMBL:EDT72410.1}; EC=3.2.1.31 {ECO:0000313|EMBL:EDT72410.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Beta-glucuronidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1B4_CLOPF
bglR; beta-D-glucuronidase
L3_108_103G1_scaffold_196_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24470..25159
DNA (690bp) protein (230aa)
Probable transcriptional regulator n=7 Tax=Clostridium perfringens RepID=Q8XP18_CLOPE
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_108_103G1_scaffold_196_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25361..26212
DNA (852bp) protein (284aa)
D-mannonate oxidoreductase {ECO:0000313|EMBL:EIA18587.1}; EC=1.1.1.131 {ECO:0000313|EMBL:EIA18587.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
D-mannonate oxidoreductase (EC:1.1.1.131)
D-mannonate oxidoreductase n=5 Tax=Clostridium perfringens RepID=H7CRU7_CLOPF
L3_108_103G1_scaffold_196_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26227..26835
DNA (609bp) protein (203aa)
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase n=4 Tax=Clostridium perfringens RepID=Q8XP16_CLOPE
2-dehydro-3-deoxyphosphogluconate aldolase
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAB79856.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 83 in total

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