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L3_108_103G1_scaffold_875

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_875_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
ATP-dependent Clp protease n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9V8_9FIRM
ATP-dependent Clp protease {ECO:0000313|EMBL:CCZ67951.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_108_103G1_scaffold_875_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(596..2563)
DNA (1968bp) protein (656aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=3 Tax=Lachnospiraceae RepID=A7AY00_RUMGN
L3_108_103G1_scaffold_875_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2584..3342)
DNA (759bp) protein (253aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Pseudouridine synthase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXZ9_RUMGN
pseudouridine synthase
L3_108_103G1_scaffold_875_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3335..4495)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AXZ8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_108_103G1_scaffold_875_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4504..5916)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67955.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein involved in D-alanine export
L3_108_103G1_scaffold_875_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5937..6428)
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AXZ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47790.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_108_103G1_scaffold_875_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6425..7183)
DNA (759bp) protein (253aa)
GDSL-like protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGN2_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CCZ67957.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Lysophospholipase L1 and related esterases
L3_108_103G1_scaffold_875_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7252..7920)
DNA (669bp) protein (223aa)
RelA/SpoT domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQB1_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CCZ67958.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
GTP pyrophosphokinase
L3_108_103G1_scaffold_875_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7922..8551)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67959.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Transcriptional regulator
L3_108_103G1_scaffold_875_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8700..9200
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7AXZ2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47794.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_108_103G1_scaffold_875_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9449..11470)
DNA (2022bp) protein (674aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9W9_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCZ67961.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Molecular chaperone, HSP90 family
L3_108_103G1_scaffold_875_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11719..12219
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47796.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
C_GCAxxG_C_C family protein
L3_108_103G1_scaffold_875_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..13036)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68216.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_108_103G1_scaffold_875_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12991..13095)
DNA (105bp) protein (35aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AXY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47798.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_108_103G1_scaffold_875_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13092..14246)
DNA (1155bp) protein (385aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase, S41 family n=3 Tax=Lachnospiraceae RepID=A7AXY5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19095.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_108_103G1_scaffold_875_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14322..15506)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68213.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Membrane-bound metallopeptidase
L3_108_103G1_scaffold_875_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15515..16468)
DNA (954bp) protein (318aa)
Cell division protein FtsX n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHA0_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
cell division protein FtsX
L3_108_103G1_scaffold_875_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16458..17144)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridiales RepID=A7AXY2_RUMGN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCZ68211.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cell division ATP-binding protein FtsE
L3_108_103G1_scaffold_875_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17253..18344)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68210.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, CdaR family
L3_108_103G1_scaffold_875_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18558..19235)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68209.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Teichoic acid biosynthesis proteins
L3_108_103G1_scaffold_875_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19346..20941)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68208.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
BadF/BadG/BcrA/BcrD type ATPase
L3_108_103G1_scaffold_875_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21170..21370)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AXX6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19102.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Small, acid-soluble spore proteins, alpha/beta type.
L3_108_103G1_scaffold_875_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21430..21621)
DNA (192bp) protein (64aa)
PspC domain protein n=4 Tax=Clostridiales RepID=A7AXX5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19103.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
phage shock protein C, PspC
L3_108_103G1_scaffold_875_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21626..22501)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7AXX4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79371.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Protein of unknown function (DUF2807).
L3_108_103G1_scaffold_875_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22502..23218)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXX3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79370.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted membrane protein
L3_108_103G1_scaffold_875_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23215..23538)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR family n=4 Tax=Clostridiales RepID=A7AXX2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47811.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, PadR family
L3_108_103G1_scaffold_875_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23708..23974)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UH91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68202.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein
L3_108_103G1_scaffold_875_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23975..27559)
DNA (3585bp) protein (1195aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXX0_RUMGN
recombination helicase AddA, Firmicutes type
L3_108_103G1_scaffold_875_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27556..30285)
DNA (2730bp) protein (910aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JXH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47814.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATP-dependent nuclease, subunit B
L3_108_103G1_scaffold_875_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30392..30985)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68199.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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