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L3_108_103G1_scaffold_502

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_502_1
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(206..784)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22221.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_2
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(896..1216)
DNA (321bp) protein (107aa)
TfoX N-terminal domain protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFT2_9FIRM
TfoX N-terminal domain protein {ECO:0000313|EMBL:EDP10330.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Regulator of competence-specific genes
L3_108_103G1_scaffold_502_3
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1243..1638)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G647_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22218.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_103G1_scaffold_502_4
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1851..3209
DNA (1359bp) protein (453aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
Putative PTS system, cellobiose-specific IIC component n=2 Tax=Firmicutes RepID=A8RFT4_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_5
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3282..3809
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22216.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
selenoB, glycine/betaine/sarcosine/D-proline reductase family protein
L3_108_103G1_scaffold_502_6
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3972..5024
DNA (1053bp) protein (351aa)
Cellulase M and related proteins (EC:3.4.11.7)
M42 glutamyl aminopeptidase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G510_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDE22215.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_7
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5037..6140
DNA (1104bp) protein (368aa)
M42 glutamyl aminopeptidase n=2 Tax=Firmicutes RepID=A8RFT7_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDE22214.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Cellulase M and related proteins
L3_108_103G1_scaffold_502_8
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6414..6863)
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=2 Tax=Firmicutes RepID=A8RFT8_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE22213.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
acetyltransferase
L3_108_103G1_scaffold_502_9
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7063..7725
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10337.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_103G1_scaffold_502_10
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7722..8117)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22211.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_103G1_scaffold_502_11
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8195..8851
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22210.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_12
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8872..9918
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G456_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22209.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_13
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9930..10571
DNA (642bp) protein (214aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Deoxyribose-phosphate aldolase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G637_9FIRM
deoC; deoxyribose-phosphate aldolase
L3_108_103G1_scaffold_502_14
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11095..11550)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10343.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_103G1_scaffold_502_15
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11832..12551
DNA (720bp) protein (240aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFU8_9FIRM
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EDP10344.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hydrolase
L3_108_103G1_scaffold_502_16
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12607..13356
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10345.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L3_108_103G1_scaffold_502_17
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13843..14085
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP10346.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_103G1_scaffold_502_18
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14197..14907
DNA (711bp) protein (237aa)
SNARE-like domain protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GAM9_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:CDE23828.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_103G1_scaffold_502_19
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15211..15540
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23827.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_20
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15681..16691)
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFV3_9FIRM
L3_108_103G1_scaffold_502_21
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16720..18030)
DNA (1311bp) protein (437aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Aspartokinase n=2 Tax=Firmicutes RepID=A8RFV4_9FIRM
aspartate kinase
L3_108_103G1_scaffold_502_22
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18023..19207)
DNA (1185bp) protein (395aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Homoserine dehydrogenase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G8X6_9FIRM
Homoserine dehydrogenase
L3_108_103G1_scaffold_502_23
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19316..20806
DNA (1491bp) protein (497aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GAM4_9FIRM
Threonine synthase {ECO:0000313|EMBL:CDE23823.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L3_108_103G1_scaffold_502_24
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20803..21687
DNA (885bp) protein (295aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
thrb3; Homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GD14_9FIRM
L3_108_103G1_scaffold_502_25
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21689..22123
DNA (435bp) protein (145aa)
UPF0735 ACT domain-containing protein BN631_00456 n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GA04_9FIRM
UPF0735 ACT domain-containing protein BN631_00456 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_108_103G1_scaffold_502_26
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22230..22958
DNA (729bp) protein (243aa)
TIGR01906 family protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9L1_9FIRM
TIGR01906 family protein {ECO:0000313|EMBL:CDE23820.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
integral membrane protein TIGR01906
L3_108_103G1_scaffold_502_27
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22951..23541
DNA (591bp) protein (197aa)
Maf-like protein BN631_00454 n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G8W8_9FIRM
Maf-like protein BN631_00454 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
maf; septum formation protein Maf
L3_108_103G1_scaffold_502_28
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23878..24759
DNA (882bp) protein (294aa)
PRD domain protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFW3_9FIRM
PRD domain protein {ECO:0000313|EMBL:EDP10357.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
transcriptional antiterminator, BglG
L3_108_103G1_scaffold_502_29
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24752..26140
DNA (1389bp) protein (463aa)
PTS system beta-glucosides-specific transporter subunit IIA (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R874_9FIRM
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDP12115.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L3_108_103G1_scaffold_502_30
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26143..26634
DNA (492bp) protein (164aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R875_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EDP12116.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
PTS system sucrose transporter subunit IIBCA
Displaying items 1-30 of 33 in total

View Taxonomy