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L3_108_103G1_scaffold_55

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Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_55_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3..749
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BNQ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41846.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
PhoH family protein
L3_108_103G1_scaffold_55_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(863..2698)
DNA (1836bp) protein (612aa)
LPXTG-domain-containing protein cell wall anchor domain n=2 Tax=Atopobium RepID=N2BJA8_9ACTN
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EMZ41847.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_55_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2915..3418
DNA (504bp) protein (168aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Endoribonuclease YbeY n=2 Tax=Atopobium RepID=N2BTH4_9ACTN
hypothetical protein
L3_108_103G1_scaffold_55_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3419..3793
DNA (375bp) protein (125aa)
undecaprenol kinase (EC:2.7.1.66)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BY19_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41849.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_55_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3803..4714
DNA (912bp) protein (304aa)
GTPase Era n=2 Tax=Atopobium RepID=N2BTN8_9ACTN
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
GTP-binding protein Era
L3_108_103G1_scaffold_55_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4721..5470
DNA (750bp) protein (250aa)
DNA repair protein RecO n=2 Tax=Atopobium RepID=N2BNQ7_9ACTN
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
DNA repair protein RecO
L3_108_103G1_scaffold_55_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


5643..5924
DNA (282bp) protein (94aa)
30S ribosomal protein S15 n=2 Tax=Atopobium RepID=N2BJB3_9ACTN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
30S ribosomal protein S15
L3_108_103G1_scaffold_55_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6011..8230
DNA (2220bp) protein (740aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Atopobium RepID=N2BTI0_9ACTN
L3_108_103G1_scaffold_55_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8538..10202
DNA (1665bp) protein (555aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BY20_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41854.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
RNA-metabolising metallo-beta-lactamase
L3_108_103G1_scaffold_55_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10210..12711
DNA (2502bp) protein (834aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BTP4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41855.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
cell division protein FtsK
L3_108_103G1_scaffold_55_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12714..14225
DNA (1512bp) protein (504aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BNR2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41856.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
transcriptional regulator, XRE family
L3_108_103G1_scaffold_55_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14237..14734
DNA (498bp) protein (166aa)
UPF0234 protein HMPREF1091_00831 n=2 Tax=Atopobium RepID=N2BJC1_9ACTN
UPF0234 protein HMPREF1091_00831 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_55_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14747..16087
DNA (1341bp) protein (447aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Atopobium RepID=N2BTI6_9ACTN
MiaB-like tRNA modifying protein YliG
L3_108_103G1_scaffold_55_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16091..16714
DNA (624bp) protein (208aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Atopobium RepID=N2BY22_9ACTN
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EMZ41859.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_55_15
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16718..17227
DNA (510bp) protein (170aa)
Competence/damage-inducible protein CinA domain n=2 Tax=Atopobium RepID=N2BTQ0_9ACTN
Competence/damage-inducible protein CinA domain {ECO:0000313|EMBL:EMZ41860.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
glycerol-3-phosphate 3-phosphatidyltransferase
L3_108_103G1_scaffold_55_16
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


17354..18433
DNA (1080bp) protein (360aa)
Protein RecA n=2 Tax=Atopobium RepID=N2BNR7_9ACTN
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
recombinase A
L3_108_103G1_scaffold_55_17
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18496..19104
DNA (609bp) protein (203aa)
Regulatory protein RecX n=2 Tax=Atopobium RepID=N2BJC7_9ACTN
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
regulatory protein RecX
L3_108_103G1_scaffold_55_18
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19369..20928
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
metal dependent phosphohydrolase (EC:3.1.4.16)
Ribonuclease Y n=2 Tax=Atopobium RepID=N2BTJ4_9ACTN
L3_108_103G1_scaffold_55_19
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20932..22023
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BY28_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41864.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP-binding region ATPase domain-containing protein
L3_108_103G1_scaffold_55_20
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22132..22428
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BTQ4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41865.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Stage V sporulation protein S
L3_108_103G1_scaffold_55_21
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22450..23820
DNA (1371bp) protein (457aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Atopobium RepID=N2BNS1_9ACTN
MiaB family RNA modification protein
L3_108_103G1_scaffold_55_22
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23817..24752
DNA (936bp) protein (312aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Atopobium RepID=N2BJD3_9ACTN
L3_108_103G1_scaffold_55_23
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24757..26064
DNA (1308bp) protein (436aa)
GTPase HflX n=2 Tax=Atopobium RepID=N2BTJ9_9ACTN
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
GTP-binding proten HflX
L3_108_103G1_scaffold_55_24
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26059..26802)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BY33_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41869.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_55_25
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26802..27467)
DNA (666bp) protein (222aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=2 Tax=Atopobium RepID=N2BTQ9_9ACTN
L3_108_103G1_scaffold_55_26
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27657..28106
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BNS7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41871.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
peptidoglycan-binding lysin domain-containing protein
L3_108_103G1_scaffold_55_27
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28226..28678
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=2 Tax=Atopobium RepID=N2BJE1_9ACTN
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP-cone domain-containing protein
L3_108_103G1_scaffold_55_28
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28668..29117
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Atopobium RepID=N2BTK6_9ACTN
L3_108_103G1_scaffold_55_29
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29184..30515
DNA (1332bp) protein (444aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BY38_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41874.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
xanthine/uracil/vitamin C permease
L3_108_103G1_scaffold_55_30
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30699..31649
DNA (951bp) protein (317aa)
Thioredoxin-disulfide reductase n=2 Tax=Atopobium RepID=N2BTR4_9ACTN
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EMZ41875.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying items 1-30 of 125 in total

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