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L3_108_103G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_82_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(203..3064)
DNA (2862bp) protein (954aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV37_9ACTN
L3_108_103G1_scaffold_82_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3283..4053
DNA (771bp) protein (257aa)
UPF0246 protein HMPREF1091_00002 n=2 Tax=Atopobium RepID=N2BZV7_9ACTN
UPF0246 protein HMPREF1091_00002 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_82_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4104..4379)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV63_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42445.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
transcriptional regulator
L3_108_103G1_scaffold_82_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4627..5403
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BQB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42446.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
radical SAM protein
L3_108_103G1_scaffold_82_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5430..6344
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BL13_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42447.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
transcriptional regulator, LysR family
L3_108_103G1_scaffold_82_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6417..7262)
DNA (846bp) protein (282aa)
DegV family EDD domain-containing protein n=2 Tax=Atopobium RepID=N2BV41_9ACTN
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EMZ42448.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
degV family protein
L3_108_103G1_scaffold_82_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7371..7862)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BZW4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42449.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
transcriptional regulator, MarR family
L3_108_103G1_scaffold_82_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8163..9125
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV67_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42450.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_82_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9180..10010)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BQC1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42451.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_82_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10091..10606
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BL20_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42452.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_82_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10598..11533)
DNA (936bp) protein (312aa)
proline-specific peptidase (EC:3.4.11.5)
Proline-specific peptidase n=1 Tax=Atopobium minutum 10063974 RepID=N2BV45_9ACTN
Proline-specific peptidase {ECO:0000313|EMBL:EMZ42453.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_82_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11534..13768)
DNA (2235bp) protein (745aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=2 Tax=Atopobium RepID=N2BZX0_9ACTN
L3_108_103G1_scaffold_82_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13781..16615)
DNA (2835bp) protein (945aa)
Exonuclease SbcC n=2 Tax=Atopobium RepID=N2BV71_9ACTN
Exonuclease SbcC {ECO:0000313|EMBL:EMZ42455.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
SMC domain-containing protein
L3_108_103G1_scaffold_82_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16616..17794)
DNA (1179bp) protein (393aa)
Exonuclease SbcCD, D subunit n=2 Tax=Atopobium RepID=N2BQC6_9ACTN
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EMZ42456.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
nuclease SbcCD subunit D
L3_108_103G1_scaffold_82_15
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18025..22866)
DNA (4842bp) protein (1614aa)
Repeat, TIGR02543 family n=2 Tax=Atopobium RepID=U2VM65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42457.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
cell wall/surface repeat protein
L3_108_103G1_scaffold_82_16
unknown

Not on your lists

comp(22934..23137)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_108_103G1_scaffold_82_17
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23254..24144)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV50_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42458.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
nucleotidyl transferase
L3_108_103G1_scaffold_82_18
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24290..25288)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BZY5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42459.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
homocysteine S-methyltransferase
L3_108_103G1_scaffold_82_19
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25413..25850)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV81_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42460.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
DtxR family iron (metal) dependent repressor
L3_108_103G1_scaffold_82_20
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26025..27299)
DNA (1275bp) protein (425aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Atopobium RepID=N2BQE1_9ACTN
UDP-N-acetylglucosamine1-carboxyvinyltransferase
L3_108_103G1_scaffold_82_21
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27333..27752)
DNA (420bp) protein (140aa)
ATP synthase epsilon chain n=2 Tax=Atopobium RepID=N2BL43_9ACTN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F1 subcomplex subunit epsilon
L3_108_103G1_scaffold_82_22
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27755..29239)
DNA (1485bp) protein (495aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F1 subcomplex subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=2 Tax=Atopobium RepID=N2BV58_9ACTN
L3_108_103G1_scaffold_82_23
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29239..30153)
DNA (915bp) protein (305aa)
ATP synthase gamma chain n=2 Tax=Atopobium RepID=N2C006_9ACTN
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F1 subcomplex subunit gamma
L3_108_103G1_scaffold_82_24
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30163..31812)
DNA (1650bp) protein (550aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F1 subcomplex subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=2 Tax=Atopobium RepID=N2BV89_9ACTN
L3_108_103G1_scaffold_82_25
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31809..32279)
DNA (471bp) protein (157aa)
ATP synthase subunit delta n=2 Tax=Atopobium RepID=N2BQF1_9ACTN
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F1 subcomplex subunit delta
L3_108_103G1_scaffold_82_26
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32272..32868)
DNA (597bp) protein (199aa)
ATP synthase subunit b n=2 Tax=Atopobium RepID=N2BL52_9ACTN
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F0 subcomplex subunit B
L3_108_103G1_scaffold_82_27
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32900..33094)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42468.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F0 subcomplex subunit C
L3_108_103G1_scaffold_82_28
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33186..33986)
DNA (801bp) protein (267aa)
ATP synthase subunit a n=2 Tax=Atopobium RepID=N2C011_9ACTN
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATP synthase F0 subcomplex subunit A
L3_108_103G1_scaffold_82_29
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33983..34294)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BV95_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42470.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_82_30
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34446..35693)
DNA (1248bp) protein (416aa)
Amidohydrolase n=2 Tax=Atopobium RepID=N2BQG3_9ACTN
Amidohydrolase {ECO:0000313|EMBL:EMZ42471.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
amidohydrolase
Displaying items 1-30 of 92 in total

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