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L3_108_103G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_393_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..540
DNA (540bp) protein (180aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=2 Tax=Atopobium RepID=N2BPA9_9ACTN
L3_108_103G1_scaffold_393_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

668..1363
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BUA4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42055.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
peptidase membrane zinc metallopeptidase
L3_108_103G1_scaffold_393_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1373..2728
DNA (1356bp) protein (452aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=2 Tax=Atopobium RepID=N2BYR3_9ACTN
L3_108_103G1_scaffold_393_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2731..2997
DNA (267bp) protein (89aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Atopobium RepID=N2BU29_9ACTN
L3_108_103G1_scaffold_393_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3031..3369
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJZ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42052.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
histidine triad (HIT) protein
L3_108_103G1_scaffold_393_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3488..4666
DNA (1179bp) protein (393aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Atopobium RepID=N2BPA5_9ACTN
L3_108_103G1_scaffold_393_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4749..5300)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BUA1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42050.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
acetyltransferase
L3_108_103G1_scaffold_393_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5551..6528)
DNA (978bp) protein (326aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=2 Tax=Atopobium RepID=N2BYR1_9ACTN
Phosphate acetyltransferase {ECO:0000313|EMBL:EMZ42049.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_393_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6728..7930
DNA (1203bp) protein (401aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=2 Tax=Atopobium RepID=N2BU26_9ACTN
UDP-galactopyranose mutase {ECO:0000313|EMBL:EMZ42048.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_393_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7940..8986
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJY5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42047.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
family 2 glycosyl transferase
L3_108_103G1_scaffold_393_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9007..9972)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BPA1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42046.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
peptidase S58 DmpA
L3_108_103G1_scaffold_393_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9969..10589)
DNA (621bp) protein (207aa)
Maf-like protein maf n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2TNC5_9ACTN
Maf-like protein HMPREF1091_01019 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
maf protein
L3_108_103G1_scaffold_393_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10722..11873
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BYQ7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42044.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
cobalamin synthesis protein P47K
L3_108_103G1_scaffold_393_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12045..14180)
DNA (2136bp) protein (712aa)
LPXTG-domain-containing protein cell wall anchor domain n=2 Tax=Atopobium RepID=N2BU23_9ACTN
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EMZ42043.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
peptidase U34 dipeptidase
L3_108_103G1_scaffold_393_15
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14330..15076)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJY0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42042.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
cobalt transport protein
L3_108_103G1_scaffold_393_16
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15069..16847)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BP97_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42041.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ABC transporter
L3_108_103G1_scaffold_393_17
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16850..17413)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BU94_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42040.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_393_18
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17738..18394)
DNA (657bp) protein (219aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Atopobium RepID=N2BYQ2_9ACTN
tRNA/rRNA methyltransferase SpoU
L3_108_103G1_scaffold_393_19
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18430..19425)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BU18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42038.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
phosphate transporter
L3_108_103G1_scaffold_393_20
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19418..20041)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJX6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42037.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_393_21
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20334..20984)
DNA (651bp) protein (217aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=2 Tax=Atopobium RepID=N2BP93_9ACTN
L3_108_103G1_scaffold_393_22
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20995..21972)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BU92_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42035.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_108_103G1_scaffold_393_23
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21972..22712)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BYQ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42034.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Predicted membrane protein
L3_108_103G1_scaffold_393_24
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22904..24562)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BJX3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42032.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ABC transporter ATP-binding protein
L3_108_103G1_scaffold_393_25
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24563..26293)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BP89_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42031.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ABC transporter ATP-binding protein
L3_108_103G1_scaffold_393_26
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26468..26743)
DNA (276bp) protein (92aa)
RelB/DinJ family addiction module antitoxin n=2 Tax=Atopobium RepID=N2BU87_9ACTN
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EMZ42030.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
RelB/DinJ family addiction module antitoxin
L3_108_103G1_scaffold_393_27
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26987..28444)
DNA (1458bp) protein (486aa)
bglA; aryl-phospho-beta-D-glucosidase BglA (EC:3.2.1.86)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BYP6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42029.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_393_28
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28466..29029)
DNA (564bp) protein (188aa)
bglP; PTS system, beta-glucoside-specific enzyme II, ABC component (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=1 Tax=Atopobium minutum 10063974 RepID=N2BU12_9ACTN
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EMZ42028.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
L3_108_103G1_scaffold_393_29
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28977..30323)
DNA (1347bp) protein (449aa)
PTS system, glucose-like IIB component n=2 Tax=Atopobium RepID=N2BJW8_9ACTN
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EMZ42027.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
PTS beta-glucoside transporter subunit IIABC
L3_108_103G1_scaffold_393_30
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30478..31137)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BP86_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42026.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Predicted membrane protein
Displaying items 1-30 of 34 in total

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