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L3_108_103G1_scaffold_1205

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_1205_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC91928.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L3_108_103G1_scaffold_1205_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(437..1144)
DNA (708bp) protein (236aa)
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W874_ATOPD
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94342.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
XRE family transcriptional regulator
L3_108_103G1_scaffold_1205_3
unknown

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1304..1456
DNA (153bp) protein (51aa)

This feature has no annotations

L3_108_103G1_scaffold_1205_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1395..1784
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W875_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94338.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_108_103G1_scaffold_1205_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2335..2913)
DNA (579bp) protein (193aa)
Isochorismatase family protein {ECO:0000313|EMBL:EWC94396.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWC94396.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Isochorismatase hydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W877_ATOPD
isochorismatase hydrolase
L3_108_103G1_scaffold_1205_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3059..4084)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN27_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92968.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L3_108_103G1_scaffold_1205_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4115..5062)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM90_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92969.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L3_108_103G1_scaffold_1205_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5113..6048)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN79_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC94393.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L3_108_103G1_scaffold_1205_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6096..7046)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN27_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92960.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L3_108_103G1_scaffold_1205_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7184..7783
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC92971.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L3_108_103G1_scaffold_1205_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7894..8787)
DNA (894bp) protein (298aa)
Paternally-expressed protein 3 protein n=1 Tax=Fusarium oxysporum f. sp. cubense (strain race 4) RepID=N1SB30_FUSC4
Uncharacterized protein {ECO:0000313|EMBL:EWC94177.1}; Flags: Fragment;; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell surface protein
L3_108_103G1_scaffold_1205_12
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8818..9636)
DNA (819bp) protein (273aa)
SzPSe-like cell surface-anchored protein n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain H70) RepID=C0MDN2_STRS7
Uncharacterized protein {ECO:0000313|EMBL:EWC94170.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell surface protein
L3_108_103G1_scaffold_1205_13
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9849..10265)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Streptococcus anginosus group RepID=T1ZEH9_STRIT
hypothetical protein
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EJP25074.1}; TaxID=1161422 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus SK1138.;"
L3_108_103G1_scaffold_1205_14
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10297..10839)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W878_ATOPD
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:EWC94178.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_108_103G1_scaffold_1205_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10832..11407)
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EWC94172.1}; EC=3.2.2.- {ECO:0000313|EMBL:EWC94172.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Phage SPO1 DNA polymerase-related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W879_ATOPD
phage SPO1 DNA polymerase-like protein
L3_108_103G1_scaffold_1205_16
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11407..12561)
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W880_ATOPD
L3_108_103G1_scaffold_1205_17
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12571..12669)
DNA (99bp) protein (33aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W881_ATOPD
carbohydrate kinase
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ACV51671.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
Displaying 17 items

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