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L3_108_103G1_scaffold_1283

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_1283_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAA8_ATOPD
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
L3_108_103G1_scaffold_1283_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(648..1724)
DNA (1077bp) protein (359aa)
Glycosyl transferase family 8 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAA9_ATOPD
Glycosyltransferase family 8 {ECO:0000313|EMBL:EWC94272.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
glycosyl transferase family protein
L3_108_103G1_scaffold_1283_3
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1811..2581)
DNA (771bp) protein (257aa)
TatD-related deoxyribonuclease n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB0_ATOPD
Hydrolase, TatD family {ECO:0000313|EMBL:EWC94271.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
TatD-related deoxyribonuclease
L3_108_103G1_scaffold_1283_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2574..3308)
DNA (735bp) protein (245aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB1_ATOPD
ThiF family protein {ECO:0000313|EMBL:EWC94255.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
UBA/THIF-type NAD/FAD binding protein
L3_108_103G1_scaffold_1283_5
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3474..6179
DNA (2706bp) protein (902aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Valine--tRNA ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB2_ATOPD
valyl-tRNA synthetase
L3_108_103G1_scaffold_1283_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6256..7929
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB3_ATOPD
L3_108_103G1_scaffold_1283_7
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7929..8582
DNA (654bp) protein (218aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB4_ATOPD
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:EWC94243.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
formiminotransferase-cyclodeaminase
L3_108_103G1_scaffold_1283_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8584..9453
DNA (870bp) protein (290aa)
Bifunctional protein FolD n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB5_ATOPD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
tetrahydrofolate dehydrogenase/cyclohydrolase
L3_108_103G1_scaffold_1283_9
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9475..10062
DNA (588bp) protein (196aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
GTP cyclohydrolase 1 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB6_ATOPD
L3_108_103G1_scaffold_1283_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10075..11499
DNA (1425bp) protein (475aa)
Bifunctional protein FolC {ECO:0000313|EMBL:EWC94267.1}; EC=6.3.2.- {ECO:0000313|EMBL:EWC94267.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC bifunctional protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB7_ATOPD
L3_108_103G1_scaffold_1283_11
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11585..11869
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAB8_ATOPD
hypothetical protein
Double zinc ribbon domain protein {ECO:0000313|EMBL:EWC93895.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Displaying 11 items

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