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L3_108_103G1_scaffold_533

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_533_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(320..931)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B8_ATOPD
Putative membrane protein {ECO:0000313|EMBL:EWC94233.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L3_108_103G1_scaffold_533_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1181..1498)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B7_ATOPD
Nitrous oxide-stimulated promoter {ECO:0000313|EMBL:EWC94347.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_108_103G1_scaffold_533_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1498..3198)
DNA (1701bp) protein (567aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B6_ATOPD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94239.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L3_108_103G1_scaffold_533_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3198..4931)
DNA (1734bp) protein (578aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B5_ATOPD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94364.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter-like protein
L3_108_103G1_scaffold_533_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5080..5628)
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B4_ATOPD
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:EWC94350.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
N-acetyltransferase GCN5
L3_108_103G1_scaffold_533_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5746..6069
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B3_ATOPD
HIRAN domain protein {ECO:0000313|EMBL:EWC94231.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L3_108_103G1_scaffold_533_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6108..7100)
DNA (993bp) protein (331aa)
Transcriptional regulator protein-like protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B2_ATOPD
WYL domain protein {ECO:0000313|EMBL:EWC94232.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
transcriptional regulator protein-like protein
L3_108_103G1_scaffold_533_8
unknown

Not on your lists

comp(7054..7200)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_108_103G1_scaffold_533_9
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7234..8361)
DNA (1128bp) protein (376aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EWC94349.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EWC94349.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Methionine synthase vitamin-B12 independent n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B1_ATOPD
Methionine synthase vitamin-B12 independent
L3_108_103G1_scaffold_533_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8463..9107)
DNA (645bp) protein (215aa)
Metal dependent phosphohydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B0_ATOPD
HD domain protein {ECO:0000313|EMBL:EWC94345.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
metal dependent phosphohydrolase
L3_108_103G1_scaffold_533_11
unknown

Not on your lists

comp(9147..9278)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_108_103G1_scaffold_533_12
unknown

Not on your lists

9507..9599
DNA (93bp) protein (31aa)

This feature has no annotations

L3_108_103G1_scaffold_533_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9643..13671
DNA (4029bp) protein (1343aa)
Cell wall/surface repeat protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9A9_ATOPD
Repeat, PF09479 {ECO:0000313|EMBL:EWC94357.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell wall/surface repeat-containing protein
L3_108_103G1_scaffold_533_14
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13716..18149
DNA (4434bp) protein (1478aa)
Putative collagen-binding protein n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MLA5_CRYCD
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EWC94378.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
collagen-binding protein
L3_108_103G1_scaffold_533_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18246..19022)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9A8_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94354.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_108_103G1_scaffold_533_16
unknown

Not on your lists

19281..19415
DNA (135bp) protein (45aa)

This feature has no annotations

L3_108_103G1_scaffold_533_17
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19602..24197)
DNA (4596bp) protein (1532aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIN0_9FIRM
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EWC94370.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
collagen-binding protein
L3_108_103G1_scaffold_533_18
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24754..25677
DNA (924bp) protein (308aa)
ApbE family lipoprotein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9A7_ATOPD
ApbE family protein {ECO:0000313|EMBL:EWC94367.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ApbE family lipoprotein
L3_108_103G1_scaffold_533_19
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25695..26303
DNA (609bp) protein (203aa)
Flavin reductase {ECO:0000313|EMBL:EWC94361.1}; EC=1.7.-.- {ECO:0000313|EMBL:EWC94361.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
NADPH-dependent FMN reductase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9A6_ATOPD
NADPH-dependent FMN reductase
L3_108_103G1_scaffold_533_20
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26324..27541
DNA (1218bp) protein (406aa)
Flavin reductase {ECO:0000313|EMBL:EWC94386.1}; EC=1.7.-.- {ECO:0000313|EMBL:EWC94386.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
NADPH-dependent FMN reductase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9A5_ATOPD
NADPH-dependent FMN reductase
Displaying 20 items

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