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L3_108_103G1_scaffold_773

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_103G1_scaffold_773_1
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3..950)
DNA (948bp) protein (316aa)
Natural resistance-associated macrophage protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8R6_ATOPD
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:EWC94740.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
natural resistance-associated macrophage protein
L3_108_103G1_scaffold_773_2
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(951..2837)
DNA (1887bp) protein (629aa)
MgtE intracellular region n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8R7_ATOPD
MgtE intracellular N-terminal domain protein {ECO:0000313|EMBL:EWC91332.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
MgtE integral membrane protein
L3_108_103G1_scaffold_773_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3278..3820)
DNA (543bp) protein (181aa)
LemA family protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8R8_ATOPD
LemA family protein {ECO:0000313|EMBL:EWC91340.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
LemA family protein
L3_108_103G1_scaffold_773_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4359..4865
DNA (507bp) protein (169aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8R9_ATOPD
zinc-binding CMP/dCMP deaminase
L3_108_103G1_scaffold_773_5
unknown

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comp(4880..5374)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_108_103G1_scaffold_773_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5496..6815)
DNA (1320bp) protein (440aa)
SAM-dependent methyltransferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S0_ATOPD
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:EWC91381.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
SAM-dependent methyltransferase
L3_108_103G1_scaffold_773_7
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6888..7268)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZR22_9ACTN
PF06993 family protein {ECO:0000313|EMBL:EWC94746.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L3_108_103G1_scaffold_773_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7312..8679)
DNA (1368bp) protein (456aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S2_ATOPD
DEAD/DEAH box helicase {ECO:0000313|EMBL:EWC94718.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
DEAD/DEAH box helicase
L3_108_103G1_scaffold_773_9
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8726..9709
DNA (984bp) protein (328aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S3_ATOPD
L3_108_103G1_scaffold_773_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9839..10399
DNA (561bp) protein (187aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Phosphodiesterase, MJ0936 family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S4_ATOPD
phosphodiesterase
L3_108_103G1_scaffold_773_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10479..11198)
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S5_ATOPD
Putative HTH-type transcriptional regulator GmuR {ECO:0000313|EMBL:EWC94706.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
GntR family transcriptional regulator
L3_108_103G1_scaffold_773_12
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11332..12729
DNA (1398bp) protein (466aa)
Glycoside hydrolase family 1 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S6_ATOPD
Glycoside hydrolase, family 1 {ECO:0000313|EMBL:EWC94723.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
glycoside hydrolase family protein
L3_108_103G1_scaffold_773_13
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12753..14192
DNA (1440bp) protein (480aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S7_ATOPD
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
PTS system lactose/cellobiose family transporter subunit IIC
L3_108_103G1_scaffold_773_14
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14269..14565
DNA (297bp) protein (99aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S8_ATOPD
PTS system, lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EWC94737.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_108_103G1_scaffold_773_15
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14622..14957
DNA (336bp) protein (112aa)
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8S9_ATOPD
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EWC91319.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L3_108_103G1_scaffold_773_16
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14972..15859
DNA (888bp) protein (296aa)
fructokinase (EC:2.7.1.4)
ROK family protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CP31_9ACTN
Putative fructokinase {ECO:0000313|EMBL:EWC94729.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L3_108_103G1_scaffold_773_17
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15983..17530)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8T0_ATOPD
Zinc-ribbon domain protein {ECO:0000313|EMBL:EWC91362.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L3_108_103G1_scaffold_773_18
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17697..18698)
DNA (1002bp) protein (334aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8T2_ATOPD
L3_108_103G1_scaffold_773_19
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19011..19442
DNA (432bp) protein (144aa)
Ferritin Dps family protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8T3_ATOPD
Putative DNA protection during starvation protein 2 {ECO:0000313|EMBL:EWC94552.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ferritin Dps family protein
L3_108_103G1_scaffold_773_20
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19784..19900
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8T4_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50522.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
Displaying 20 items

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