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L3_108_365G1_scaffold_2386

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_2386_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..708)
DNA (708bp) protein (236aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWI5_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_108_365G1_scaffold_2386_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(705..1397)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZQ4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG91774.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_365G1_scaffold_2386_3
unknown

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comp(1427..1603)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_108_365G1_scaffold_2386_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1656..3941)
DNA (2286bp) protein (762aa)
Efflux ABC transporter, permease protein n=3 Tax=root RepID=B6FKL1_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA83406.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted permease.
L3_108_365G1_scaffold_2386_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3943..4605)
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKL0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83405.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter ATP-binding protein
L3_108_365G1_scaffold_2386_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4767..4889)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83392.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_2386_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4899..5549)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4ML02_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34435.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_108_365G1_scaffold_2386_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5542..6402)
DNA (861bp) protein (287aa)
ABC-type multidrug transport system, ATPase component n=6 Tax=root RepID=D4K535_9FIRM
ABC-type multidrug transport system, ATPase component
Uncharacterized protein {ECO:0000313|EMBL:EHF06654.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_108_365G1_scaffold_2386_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6395..6778)
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=8 Tax=root RepID=D4LTR7_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL24175.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_108_365G1_scaffold_2386_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7050..7358)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83388.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_108_365G1_scaffold_2386_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7754..8419
DNA (666bp) protein (222aa)
Response regulator receiver domain protein n=3 Tax=Clostridiales RepID=A5Z504_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM52054.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_365G1_scaffold_2386_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8475..9392
DNA (918bp) protein (306aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKJ1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA83386.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L3_108_365G1_scaffold_2386_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9385..10206
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=root RepID=A5Z502_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52052.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_108_365G1_scaffold_2386_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10233..11111
DNA (879bp) protein (293aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=A5Z501_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM52051.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Signal transduction histidine kinase
L3_108_365G1_scaffold_2386_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11148..11498)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z500_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52050.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_108_365G1_scaffold_2386_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11437..11718)
DNA (282bp) protein (94aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKI7_9CLOT
Cna protein B-type domain protein {ECO:0000313|EMBL:EDM52049.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
Displaying 16 items

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