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L3_108_365G1_scaffold_3130

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_3130_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(50..1582)
DNA (1533bp) protein (511aa)
Resolvase, N-terminal domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6L4_RUMGN
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDN76405.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
resolvase
L3_108_365G1_scaffold_3130_2
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2050..2421)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5RTR5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK16948.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L3_108_365G1_scaffold_3130_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2583..3386)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZB1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48527.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
NAD-dependent DNA ligase
L3_108_365G1_scaffold_3130_4
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3454..4092)
DNA (639bp) protein (213aa)
Putative repressor LexA n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZK71_9FIRM
Putative repressor LexA {ECO:0000313|EMBL:CDA29302.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
SOS-response transcriptional repressor, LexA
L3_108_365G1_scaffold_3130_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4260..4469
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q2K9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK50586.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_108_365G1_scaffold_3130_6
unknown

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4574..4768
DNA (195bp) protein (65aa)

This feature has no annotations

L3_108_365G1_scaffold_3130_7
unknown

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comp(4743..4922)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_108_365G1_scaffold_3130_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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5350..5532
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11061.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_108_365G1_scaffold_3130_9
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5550..5780
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C1N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69395.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L3_108_365G1_scaffold_3130_10
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5772..6077)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacillus thuringiensis RepID=J3V9A3_BACTU
hypothetical protein
YjcQ family protein {ECO:0000313|EMBL:AJH05318.1}; TaxID=1452729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis HD1002.;"
L3_108_365G1_scaffold_3130_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6207..6392
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48520.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_108_365G1_scaffold_3130_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6630..6854
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C097_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48518.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_108_365G1_scaffold_3130_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6811..6969
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68266.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_108_365G1_scaffold_3130_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6991..7275
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68265.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_108_365G1_scaffold_3130_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7437..8159
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYH5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20169.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_108_365G1_scaffold_3130_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8161..8598
DNA (438bp) protein (146aa)
Ribonuclease HI (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68263.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_108_365G1_scaffold_3130_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8591..9046
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68262.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_108_365G1_scaffold_3130_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9043..9297
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZC6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48512.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Displaying 18 items

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