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L3_108_365G1_scaffold_1078

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_1078_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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241..1422
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81709.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative ABC transporter substrate-binding protein
L3_108_365G1_scaffold_1078_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1504..3045
DNA (1542bp) protein (514aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridium RepID=R6PFG2_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC22335.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ABC transporter ATP-binding protein
L3_108_365G1_scaffold_1078_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3038..4177
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22334.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ABC transporter permease protein
L3_108_365G1_scaffold_1078_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4177..5118
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FQH3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA81713.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative ABC transporter permease protein
L3_108_365G1_scaffold_1078_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5160..5945
DNA (786bp) protein (262aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
uridine phosphorylase (EC:2.4.2.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK46_9CLOT
L3_108_365G1_scaffold_1078_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5955..6620
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=2 Tax=Clostridium RepID=B6FQH5_9CLOT
L3_108_365G1_scaffold_1078_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6640..7059
DNA (420bp) protein (140aa)
cytidine deaminase (EC:3.5.4.5)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PFF8_9CLOT
Putative cytidine deaminase {ECO:0000313|EMBL:EEA81716.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_108_365G1_scaffold_1078_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7071..8048
DNA (978bp) protein (326aa)
adenosine deaminase (EC:3.5.4.4)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PN99_9CLOT
Putative adenosine deaminase {ECO:0000313|EMBL:EEA81717.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_108_365G1_scaffold_1078_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8072..9262
DNA (1191bp) protein (397aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=2 Tax=Clostridium RepID=B6FQH8_9CLOT
L3_108_365G1_scaffold_1078_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9276..9914
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22327.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_1078_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9933..10661
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22326.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cyclic nucleotide-binding domain-containing protein
L3_108_365G1_scaffold_1078_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10681..11502
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Purine nucleoside phosphorylase n=2 Tax=Clostridium RepID=B6FQI1_9CLOT
purine nucleoside phosphorylase
L3_108_365G1_scaffold_1078_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11533..13623
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81722.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
5'-nucleotidase domain-containing protein
L3_108_365G1_scaffold_1078_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13721..19489
DNA (5769bp) protein (1923aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81723.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cell wall binding domain-containing protein
L3_108_365G1_scaffold_1078_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19536..20678
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22322.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YibE/F-like protein
L3_108_365G1_scaffold_1078_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20813..21265
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22321.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_1078_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21277..21492
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22320.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
XRE family transcriptional regulator
L3_108_365G1_scaffold_1078_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21514..21825
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22319.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_108_365G1_scaffold_1078_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21830..23320
DNA (1491bp) protein (497aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22318.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_1078_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23401..24246
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Fumarate hydratase n=2 Tax=Clostridium RepID=B6FQI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22317.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_108_365G1_scaffold_1078_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24256..24804
DNA (549bp) protein (183aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Fumarate hydratase, beta subunit n=2 Tax=Clostridium RepID=B6FQJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22316.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_108_365G1_scaffold_1078_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24819..25535
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQJ1_9CLOT
L3_108_365G1_scaffold_1078_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25545..26579
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81732.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transglutaminase-like superfamily.
L3_108_365G1_scaffold_1078_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26612..27115
DNA (504bp) protein (168aa)
PduO protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQJ3_9CLOT
PduO protein {ECO:0000313|EMBL:EEA81733.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATP:cob(I)alamin adenosyltransferase
L3_108_365G1_scaffold_1078_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27157..27354
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81734.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying 25 items

View Taxonomy