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L3_108_365G1_scaffold_1854

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_1854_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106..522)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80407.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_1854_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(476..940)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80407.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_108_365G1_scaffold_1854_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(981..1136)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80408.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
monovalent cation:proton antiporter-2 (CPA2) family protein
L3_108_365G1_scaffold_1854_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1176..1532)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80409.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sodium/hydrogen exchanger
L3_108_365G1_scaffold_1854_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1548..2195)
DNA (648bp) protein (216aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB7_9CLOT
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EEA80410.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sodium/hydrogen exchanger
L3_108_365G1_scaffold_1854_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2189..2830)
DNA (642bp) protein (214aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB8_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEA80411.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulator
L3_108_365G1_scaffold_1854_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2916..4355)
DNA (1440bp) protein (480aa)
sacA.1; beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB9_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EEA80412.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_108_365G1_scaffold_1854_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4389..5801)
DNA (1413bp) protein (471aa)
PTS system sucrose-specific EIIBC component {ECO:0000313|EMBL:EEA80413.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEA80413.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sacP; PTS system, sucrose-specific IIBC component (EC:2.7.1.69)
PTS system sucrose-specific EIIBC component n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUC0_9CLOT
L3_108_365G1_scaffold_1854_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5980..6972)
DNA (993bp) protein (331aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUC2_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEA80415.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
scrR.1; LacI family sucrose operon transcriptional repressor
L3_108_365G1_scaffold_1854_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7088..8305
DNA (1218bp) protein (406aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUC3_9CLOT
L3_108_365G1_scaffold_1854_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8349..9206)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FUC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23789.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_1854_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9359..10195)
DNA (837bp) protein (279aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Hydrolase, NUDIX family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUC5_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEA80418.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_108_365G1_scaffold_1854_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10345..11292
DNA (948bp) protein (316aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23787.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_108_365G1_scaffold_1854_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11306..13504)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PZ67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23786.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_108_365G1_scaffold_1854_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13450..13944)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AU67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86824.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_108_365G1_scaffold_1854_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13937..14734)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AU68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86825.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
Displaying 16 items

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