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L3_108_365G1_scaffold_1911

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_1911_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..172)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69255.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_365G1_scaffold_1911_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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441..971
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=root RepID=A7VX89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60386.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Helix-turn-helix.
L3_108_365G1_scaffold_1911_3
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1312..4053)
DNA (2742bp) protein (914aa)
VE01 n=1 Tax=Clostridium sp. CAG:413 RepID=R6PPT8_9CLOT
VE01 {ECO:0000313|EMBL:CDC11812.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_108_365G1_scaffold_1911_4
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4080..7082)
DNA (3003bp) protein (1001aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQ59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48473.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
type III restriction protein res subunit
L3_108_365G1_scaffold_1911_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7069..7680)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Streptococcus marimammalium RepID=UPI00037AA20F
Uncharacterized protein {ECO:0000313|EMBL:CCL31036.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_108_365G1_scaffold_1911_6
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7684..8961)
DNA (1278bp) protein (426aa)
Putative type I restriction-modification system n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5W265_9FIRM
Putative type I restriction-modification system {ECO:0000313|EMBL:CCZ94184.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
restriction modification system DNA specificity subunit
L3_108_365G1_scaffold_1911_7
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8958..10688)
DNA (1731bp) protein (577aa)
N-6 DNA methylase n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VUM6_9FIRM
N-6 DNA methylase {ECO:0000313|EMBL:CCZ94185.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
N-6 DNA methylase
L3_108_365G1_scaffold_1911_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10685..10909)
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=N9ZGV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47374.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_108_365G1_scaffold_1911_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11051..11296)
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=R0B4A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52820.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_108_365G1_scaffold_1911_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11807..12040)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=R0AN52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47372.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_108_365G1_scaffold_1911_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12125..13282)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50780.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_1911_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13272..13607)
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=G9YQU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50779.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_108_365G1_scaffold_1911_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13612..14565)
DNA (954bp) protein (318aa)
Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL77_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB76735.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Site-specific recombinase XerD
Displaying 13 items

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