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L3_108_365G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_56_1
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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119..1648
DNA (1530bp) protein (510aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKP9_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EHO84899.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
ABC transporter permease component
L3_108_365G1_scaffold_56_2
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1641..2378
DNA (738bp) protein (246aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F9C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84900.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_108_365G1_scaffold_56_3
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2595..2795
DNA (201bp) protein (67aa)
Sporulation protein YqfC n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKQ1_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:EHO84901.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_108_365G1_scaffold_56_4
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2785..3711
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84902.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
stage IV sporulation protein
L3_108_365G1_scaffold_56_5
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3728..4714
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84903.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
phosphate starvation protein PhoH
L3_108_365G1_scaffold_56_6
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4692..5372
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84904.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
two-component system response regulator
L3_108_365G1_scaffold_56_7
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5359..6573
DNA (1215bp) protein (405aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKQ5_9FIRM
two-component system sensor histidine kinase phosphate regulon sensor PhoR
L3_108_365G1_scaffold_56_8
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7379..8305
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F8S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84906.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
pstS; phosphate ABC transporter substrate-binding protein
L3_108_365G1_scaffold_56_9
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8378..9319
DNA (942bp) protein (314aa)
Phosphate ABC transporter, permease PstC n=2 Tax=Firmicutes RepID=H1BKQ7_9FIRM
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EHO84907.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
pstC; phosphate ABC transporter permease
L3_108_365G1_scaffold_56_10
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9316..10560
DNA (1245bp) protein (415aa)
Phosphate ABC transporter, permease PstA n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKQ8_9FIRM
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EHO84908.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
phosphate ABC transporter permease
L3_108_365G1_scaffold_56_11
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10637..11395
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Phosphate import ATP-binding protein PstB n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKQ9_9FIRM
phosphate import ATP-binding protein
L3_108_365G1_scaffold_56_12
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11407..12045
DNA (639bp) protein (213aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Firmicutes RepID=H1BKR0_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
phosphate transport system regulatory protein PhoU
L3_108_365G1_scaffold_56_13
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12159..13844)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F8R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84911.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Na/Pi-cotransporter family protein
L3_108_365G1_scaffold_56_14
unknown

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13925..14062
DNA (138bp) protein (46aa)

This feature has no annotations

L3_108_365G1_scaffold_56_15
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14105..14572
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Endoribonuclease YbeY n=3 Tax=Firmicutes RepID=H1BKR2_9FIRM
conserved hypothetical protein TIGR00043
L3_108_365G1_scaffold_56_16
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14541..14909
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84913.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
dgkA; diacylglycerol kinase
L3_108_365G1_scaffold_56_17
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14896..15297
DNA (402bp) protein (134aa)
cdd2; cytidine deaminase Cdd (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Firmicutes RepID=H1BKR4_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:EFE46944.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
L3_108_365G1_scaffold_56_18
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15294..16199
DNA (906bp) protein (302aa)
GTPase Era n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKR5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
GTP-binding protein Era
L3_108_365G1_scaffold_56_19
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16189..16920
DNA (732bp) protein (244aa)
DNA repair protein RecO n=2 Tax=Firmicutes RepID=H1BKR6_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
recO; DNA repair protein RecO
L3_108_365G1_scaffold_56_20
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17249..18631
DNA (1383bp) protein (461aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Glycine--tRNA ligase n=2 Tax=Firmicutes RepID=H1BKR7_9FIRM
glyS; glycyl-tRNA synthetase
L3_108_365G1_scaffold_56_21
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18653..20422
DNA (1770bp) protein (590aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
DNA primase n=2 Tax=Firmicutes RepID=H1BKR8_9FIRM
dnaG; DNA primase
L3_108_365G1_scaffold_56_22
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20427..21617
DNA (1191bp) protein (397aa)
RNA polymerase sigma factor SigA n=2 Tax=Firmicutes RepID=H1BKR9_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
sigA; RNA polymerase sigma factor RpoD
L3_108_365G1_scaffold_56_23
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21619..22302
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=2 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84920.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Bcl-2 family protein
L3_108_365G1_scaffold_56_24
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22406..23323)
DNA (918bp) protein (306aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS1_9FIRM
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
L3_108_365G1_scaffold_56_25
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23486..24847
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84922.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
ATP-dependent RNA helicase
L3_108_365G1_scaffold_56_26
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24844..25728
DNA (885bp) protein (295aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Probable endonuclease 4 n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS3_9FIRM
endonuclease IV
L3_108_365G1_scaffold_56_27
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25874..26947)
DNA (1074bp) protein (358aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS4_9FIRM
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L3_108_365G1_scaffold_56_28
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27059..29158
DNA (2100bp) protein (700aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO84925.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_108_365G1_scaffold_56_29
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


29231..29380
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Firmicutes RepID=H1BKS6_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
LSU ribosomal protein L33P
L3_108_365G1_scaffold_56_30
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29419..30027
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F9J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46931.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Zn-dependent hydrolase
Displaying items 1-30 of 175 in total

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