ggKbase home page

L3_108_365G1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 229 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_67_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70..1683
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JPV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64902.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Predicted metal-dependent hydrolase with the TIM-barrel fold
L3_108_365G1_scaffold_67_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1729..2364
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C657_9CLOT
L3_108_365G1_scaffold_67_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2452..3612
DNA (1161bp) protein (387aa)
Spore germination protein YaaH n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TA25_9CLOT
Spore germination protein YaaH {ECO:0000313|EMBL:CCZ62518.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycoside hydrolase
L3_108_365G1_scaffold_67_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3685..4671
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43640.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_108_365G1_scaffold_67_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4682..6691
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J400_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43642.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
molybdopterin oxidoreductase
L3_108_365G1_scaffold_67_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6688..7989
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60315.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Protein of unknown function (DUF1576).
L3_108_365G1_scaffold_67_7
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8224..8475
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UQY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73192.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_108_365G1_scaffold_67_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8491..8886
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61402.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_108_365G1_scaffold_67_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9051..9410)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60223.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_108_365G1_scaffold_67_10
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9410..9904)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JR44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63785.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_108_365G1_scaffold_67_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10079..10591
DNA (513bp) protein (171aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSD9_9CLOT
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EHE95670.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
heptaprenyl diphosphate synthase component I
L3_108_365G1_scaffold_67_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10747..12273
DNA (1527bp) protein (509aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J409_9CLOT
L3_108_365G1_scaffold_67_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12351..12683
DNA (333bp) protein (111aa)
cupin n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B56A44
Cupin domain protein {ECO:0000313|EMBL:KJJ69602.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Cupin domain.
L3_108_365G1_scaffold_67_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12782..14218)
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95667.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
GerA spore germination protein
L3_108_365G1_scaffold_67_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14692..15126
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSD4_9CLOT
HTH-type transcriptional regulator CymR {ECO:0000313|EMBL:KJJ69599.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
transcriptional regulator, BadM/Rrf2 family
L3_108_365G1_scaffold_67_16
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15155..15967)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JJT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61560.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_108_365G1_scaffold_67_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16321..18297
DNA (1977bp) protein (659aa)
NAD+ synthase {ECO:0000313|EMBL:EEQ60242.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EEQ60242.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NAD+ synthase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQE8_9FIRM
NAD+ synthetase
L3_108_365G1_scaffold_67_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18294..19088
DNA (795bp) protein (265aa)
TrmH family RNA methyltransferase n=2 Tax=Clostridium bolteae RepID=R0AH54_9CLOT
TrmH family RNA methyltransferase {ECO:0000313|EMBL:ENZ51565.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
rRNA methylases
L3_108_365G1_scaffold_67_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19136..19354
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J441_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43682.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Membrane protein implicated in regulation of membrane protease activity
L3_108_365G1_scaffold_67_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19351..20484
DNA (1134bp) protein (378aa)
Phospholipase, patatin family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQF0_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EEQ60244.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
patatin
L3_108_365G1_scaffold_67_21
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20489..21778)
DNA (1290bp) protein (430aa)
Aminotransferase, class V n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZP1_9CLOT
Aminotransferase, class V {ECO:0000313|EMBL:EEG74619.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
class V aminotransferase
L3_108_365G1_scaffold_67_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21902..22810
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W6R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06798.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Transcriptional regulator
L3_108_365G1_scaffold_67_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22929..23690
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06799.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Allophanate hydrolase subunit 1
L3_108_365G1_scaffold_67_24
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23690..24655
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06800.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
biotin-dependent carboxylase uncharacterized domain
L3_108_365G1_scaffold_67_25
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24669..25628
DNA (960bp) protein (320aa)
Glycerate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MI42_9FIRM
Glycerate dehydrogenase {ECO:0000313|EMBL:EOS70346.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_108_365G1_scaffold_67_26
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25667..26422
DNA (756bp) protein (252aa)
UPF0271 protein BN605_00282 n=1 Tax=Dorea sp. CAG:317 RepID=R6WIX4_9FIRM
UPF0271 protein BN605_00282 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L3_108_365G1_scaffold_67_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26462..27832
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06805.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Na+/H+-dicarboxylate symporters
L3_108_365G1_scaffold_67_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28052..29041
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=9 Tax=Clostridium RepID=G5I3K9_9CLOT
L3_108_365G1_scaffold_67_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29090..29398
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43689.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_108_365G1_scaffold_67_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29415..30395
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQF3_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Displaying items 1-30 of 229 in total

View Taxonomy