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L3_108_365G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_108_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
pfk; 6-phosphofructokinase (EC:2.7.1.11)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C795_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55915.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_108_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

233..1201
DNA (969bp) protein (323aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C794_9FIRM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KGF55914.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_108_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..1677)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DIC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79416.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
L3_108_365G1_scaffold_108_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1699..2832)
DNA (1134bp) protein (378aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
isoaspartyl dipeptidase (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C792_9FIRM
L3_108_365G1_scaffold_108_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2862..4316)
DNA (1455bp) protein (485aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BMN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55911.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
RND family efflux transporter, MFP subunit
L3_108_365G1_scaffold_108_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4333..6645)
DNA (2313bp) protein (771aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55910.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_108_365G1_scaffold_108_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6647..7348)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C789_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55909.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_108_365G1_scaffold_108_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7511..8107)
DNA (597bp) protein (199aa)
CotJC protein n=3 Tax=Clostridiales RepID=G9YMP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55908.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
manganese containing catalase
L3_108_365G1_scaffold_108_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8108..8566)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C787_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55907.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
CotJB protein
L3_108_365G1_scaffold_108_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8753..9211)
DNA (459bp) protein (153aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5S4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55906.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
beta-D-galactosidase
L3_108_365G1_scaffold_108_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9339..10091
DNA (753bp) protein (251aa)
putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DD78_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERI79407.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_108_365G1_scaffold_108_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10088..11461
DNA (1374bp) protein (458aa)
DNA repair protein radA n=3 Tax=Clostridiales RepID=H1C784_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
radA; DNA repair protein RadA
L3_108_365G1_scaffold_108_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11794..12012)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55903.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Helix-turn-helix.
L3_108_365G1_scaffold_108_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12195..12419
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53901.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_108_365G1_scaffold_108_15
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

12416..13120
DNA (705bp) protein (235aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0Y525_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB09872.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
LigA
L3_108_365G1_scaffold_108_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13161..14144
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56038.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_108_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14237..14548
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56037.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_108_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14723..15247
DNA (525bp) protein (175aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56036.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage integrase family protein
L3_108_365G1_scaffold_108_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15347..16375
DNA (1029bp) protein (343aa)
Tyrosine recombinase XerC n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C783_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
xerC; tyrosine recombinase XerC
L3_108_365G1_scaffold_108_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16415..17854)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C782_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35669.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
L3_108_365G1_scaffold_108_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18063..18596)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C5S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35668.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_108_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18677..20677)
DNA (2001bp) protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS8_9FIRM
L3_108_365G1_scaffold_108_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20619..21308)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C779_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56031.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
VanZ family protein
L3_108_365G1_scaffold_108_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21389..22174)
DNA (786bp) protein (262aa)
Sporulation protein YunB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C778_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:EHO35665.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_108_365G1_scaffold_108_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22116..23366)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C777_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:KGF56029.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
aluminum resistance family protein
L3_108_365G1_scaffold_108_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23405..24403)
DNA (999bp) protein (333aa)
M42 glutamyl aminopeptidase n=2 Tax=Clostridiales RepID=U2C5R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56028.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M42 family protein
L3_108_365G1_scaffold_108_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24410..25435)
DNA (1026bp) protein (342aa)
endoglucanase M (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56027.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_108_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25432..26454)
DNA (1023bp) protein (341aa)
M42 glutamyl aminopeptidase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56026.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M42
L3_108_365G1_scaffold_108_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26525..27913)
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C773_9FIRM
L3_108_365G1_scaffold_108_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28071..28685
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C772_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56024.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted methylated DNA-protein cysteine methyltransferase
Displaying items 1-30 of 138 in total

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