ggKbase home page

L3_108_365G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_142_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

201..1103
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44033.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_142_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1348..1908
DNA (561bp) protein (187aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BFV2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI70733.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
N-acetyltransferase GCN5
L3_108_365G1_scaffold_142_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2058..3023
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4X2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97919.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
GNAT family acetyltransferase
L3_108_365G1_scaffold_142_4
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3112..3417)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MYT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75846.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L3_108_365G1_scaffold_142_5
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3508..4407)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KEN6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL00137.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L3_108_365G1_scaffold_142_6
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4539..5933)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
Signal transduction histidine kinase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KKH3_9FIRM
signal transduction histidine kinase
L3_108_365G1_scaffold_142_7
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5923..6588)
DNA (666bp) protein (222aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHZ6_9FIRM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGL00135.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L3_108_365G1_scaffold_142_8
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6737..7132)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SW43_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL51187.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_108_365G1_scaffold_142_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7304..8215
DNA (912bp) protein (304aa)
Cation diffusion facilitator family transporter n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4A8_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EGN44036.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
cation efflux system protein
L3_108_365G1_scaffold_142_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8345..8737)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52778.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
S-layer protein
L3_108_365G1_scaffold_142_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9297..10184
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44038.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_142_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10196..10807
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44039.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
regulatory protein TetR
L3_108_365G1_scaffold_142_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10887..13322)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44042.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative membrane protein
L3_108_365G1_scaffold_142_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13623..16514
DNA (2892bp) protein (964aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AZH4_9CLOT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ37432.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_108_365G1_scaffold_142_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16554..17504)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44049.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
LysR family transcriptional regulator
L3_108_365G1_scaffold_142_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17662..18747
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44050.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
NAD/NADP octopine/nopaline dehydrogenase
L3_108_365G1_scaffold_142_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18805..19341
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44051.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
flavin reductase domain protein FMN-binding protein
L3_108_365G1_scaffold_142_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19409..20023)
DNA (615bp) protein (205aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D1_9FIRM
L3_108_365G1_scaffold_142_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20020..20430)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44060.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AraC family transcriptional regulator
L3_108_365G1_scaffold_142_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20632..21297
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44061.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-binding response regulator
L3_108_365G1_scaffold_142_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21294..22319
DNA (1026bp) protein (342aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D4_9FIRM
Signal transduction histidine kinase
L3_108_365G1_scaffold_142_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22405..23163
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN44063.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_108_365G1_scaffold_142_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23150..25099
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44064.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_142_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25143..26213)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9XB25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59481.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter
L3_108_365G1_scaffold_142_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26303..27142)
DNA (840bp) protein (280aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CCD4_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66917.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_108_365G1_scaffold_142_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27139..28041)
DNA (903bp) protein (301aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9XBP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59483.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_108_365G1_scaffold_142_27
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27992..29266)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZ44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64134.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_108_365G1_scaffold_142_28
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29256..31247)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AM46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66914.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Membrane-fusion protein
L3_108_365G1_scaffold_142_29
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31270..31851)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95201.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_108_365G1_scaffold_142_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31882..33990)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CHU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66911.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type sugar transport system, periplasmic component
Displaying items 1-30 of 108 in total

View Taxonomy