ggKbase home page

L3_108_365G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_191_1
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115..1014)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80956.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L3_108_365G1_scaffold_191_2
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1189..1647
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80955.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
MarR family regulatory protein
L3_108_365G1_scaffold_191_3
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1619..2083
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80954.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
multidrug ABC transporter ATPase/permease
L3_108_365G1_scaffold_191_4
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2093..3355
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80953.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
ABC transporter
L3_108_365G1_scaffold_191_5
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3355..5220
DNA (1866bp) protein (622aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80952.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
ABC-type multidrug transport system, ATPase and permease components
L3_108_365G1_scaffold_191_6
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5830..6600)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80951.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
putative transporter
L3_108_365G1_scaffold_191_7
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6594..7037)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FAM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80950.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Transcriptional regulators
L3_108_365G1_scaffold_191_8
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7266..8825)
DNA (1560bp) protein (520aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQF1_9FIRM
histidine kinase
L3_108_365G1_scaffold_191_9
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8809..9489)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FAJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80948.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_108_365G1_scaffold_191_10
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9597..10295)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80947.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
GCN5-like N-acetyltransferase
L3_108_365G1_scaffold_191_11
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10575..11432)
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Firmicutes RepID=H1BQE8_9FIRM
tetrapyrrole methylase family protein
L3_108_365G1_scaffold_191_12
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11442..12428)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FAM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47618.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
putative PSP1-like protein
L3_108_365G1_scaffold_191_13
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12425..13402)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FB85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80944.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
DNA polymerase III subunit delta'
L3_108_365G1_scaffold_191_14
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13395..14030)
DNA (636bp) protein (212aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Thymidylate kinase n=2 Tax=Eubacterium sp. 3_1_31 RepID=H1BQE5_9FIRM
thymidylate kinase
L3_108_365G1_scaffold_191_15
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14417..15067
DNA (651bp) protein (217aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP23_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHO81569.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein UPF0001
L3_108_365G1_scaffold_191_16
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15304..16011)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81570.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Gp37Gp68 family protein
L3_108_365G1_scaffold_191_17
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16123..16857)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81571.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
UBA/THIF-type NAD/FAD binding protein
L3_108_365G1_scaffold_191_18
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16842..17753)
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
tRNA dimethylallyltransferase n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP26_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L3_108_365G1_scaffold_191_19
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17756..19834)
DNA (2079bp) protein (693aa)
DNA mismatch repair protein MutL n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP27_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
mutL; DNA mismatch repair protein MutL
L3_108_365G1_scaffold_191_20
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19873..22404)
DNA (2532bp) protein (844aa)
DNA mismatch repair protein MutS n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP28_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
DNA mismatch repair protein MutS
L3_108_365G1_scaffold_191_21
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22621..23829
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5FBQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81575.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
FtsW/RodA/SpoVE family cell division protein
L3_108_365G1_scaffold_191_22
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23894..24790)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81576.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L3_108_365G1_scaffold_191_23
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24841..25614)
DNA (774bp) protein (258aa)
NAD kinase {ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.- {ECO:0000256|SAAS:SAAS00274461};; EC=2.7.1.23 {ECO:0000256|SAAS:SAAS00037533};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP31_9FIRM
L3_108_365G1_scaffold_191_24
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25673..26218
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81578.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L3_108_365G1_scaffold_191_25
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26420..27361)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81579.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L3_108_365G1_scaffold_191_26
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27447..28037)
DNA (591bp) protein (197aa)
Recombination protein RecR n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP34_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
recR; recombination protein RecR
L3_108_365G1_scaffold_191_27
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28037..28345)
DNA (309bp) protein (103aa)
Nucleoid-associated protein HMPREF0984_02142 n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP35_9FIRM
Nucleoid-associated protein HMPREF0984_02142 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
conserved hypothetical protein TIGR00103
L3_108_365G1_scaffold_191_28
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28351..30156)
DNA (1806bp) protein (602aa)
DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP36_9FIRM
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EHO81582.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
dnaX; DNA polymerase III subunits gamma and tau
L3_108_365G1_scaffold_191_29
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30234..30749)
DNA (516bp) protein (172aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Putative uncharacterized protein n=2 Tax=Eubacterium sp. 3_1_31 RepID=H1BP37_9FIRM
adenosine deaminase
L3_108_365G1_scaffold_191_30
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31524..32810)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase n=2 Tax=Firmicutes RepID=H1BP38_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:EFE47692.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
Displaying items 1-30 of 93 in total

View Taxonomy