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L3_108_365G1_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_199_1
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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400..1173
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00031CB044
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AFY84097.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
L3_108_365G1_scaffold_199_2
unknown

Not on your lists

1442..1843
DNA (402bp) protein (134aa)

This feature has no annotations

L3_108_365G1_scaffold_199_3
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1940..3721
DNA (1782bp) protein (594aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4Z8I2_PAEAL
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJW17672.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
ABC-type oligopeptide transport system, periplasmic component
L3_108_365G1_scaffold_199_4
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3788..4744
DNA (957bp) protein (319aa)
Peptide ABC transporter permease n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SJ34_9BACL
Peptide ABC transporter permease {ECO:0000313|EMBL:EHQ60925.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_108_365G1_scaffold_199_5
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4737..5897
DNA (1161bp) protein (387aa)
Oligopeptide ABC transporter permease OppC n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SJ33_9BACL
Oligopeptide ABC transporter permease OppC {ECO:0000313|EMBL:EHQ60924.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_108_365G1_scaffold_199_6
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5938..7002
DNA (1065bp) protein (355aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SJ32_9BACL
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHQ60923.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_108_365G1_scaffold_199_7
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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6995..7930
DNA (936bp) protein (312aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SJ31_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KGF07924.1}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S7-1-4.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_108_365G1_scaffold_199_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7958..9616
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LTY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85561.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_108_365G1_scaffold_199_9
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9634..11310
DNA (1677bp) protein (559aa)
Oligoendopeptidase M3 family n=1 Tax=Blautia sp. CAG:37 RepID=R7JTD8_9FIRM
Oligoendopeptidase M3 family {ECO:0000313|EMBL:CDE66843.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
oligoendopeptidase, M3 family
L3_108_365G1_scaffold_199_10
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11477..12238
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BTU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57609.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L3_108_365G1_scaffold_199_11
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12253..12705
DNA (453bp) protein (151aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Lachnospiraceae RepID=A7B4Q7_RUMGN
PTS system protein IIA component, L-Asc family {ECO:0000313|EMBL:EXG87185.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L3_108_365G1_scaffold_199_12
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12834..13523
DNA (690bp) protein (230aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Blautia sp. CAG:52 RepID=R6GGT7_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDB20486.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_108_365G1_scaffold_199_13
unknown

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13498..13761
DNA (264bp) protein (88aa)

This feature has no annotations

L3_108_365G1_scaffold_199_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13771..15558)
DNA (1788bp) protein (596aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MY44_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC04653.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
multidrug ABC transporter ATPase and permease
L3_108_365G1_scaffold_199_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15559..17361)
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YPL9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM52535.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
multidrug ABC transporter ATPase and permease
L3_108_365G1_scaffold_199_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17506..18123)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VT00_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDO61296.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator, TetR family
L3_108_365G1_scaffold_199_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18340..19437
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBP1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07977.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_108_365G1_scaffold_199_18
unknown

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19391..19525
DNA (135bp) protein (45aa)

This feature has no annotations

L3_108_365G1_scaffold_199_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19548..20069
DNA (522bp) protein (174aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAQ9_9FIRM
Cytosine/adenosine deaminases
L3_108_365G1_scaffold_199_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20422..22164
DNA (1743bp) protein (581aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XV31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55901.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_108_365G1_scaffold_199_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22161..22799
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBN7_CLOSV
L3_108_365G1_scaffold_199_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22819..22920
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22582.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_108_365G1_scaffold_199_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22941..24080
DNA (1140bp) protein (380aa)
G5 domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WFG8_9FIRM
G5 domain protein {ECO:0000313|EMBL:CDD08145.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
VanW family protein
L3_108_365G1_scaffold_199_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24093..25076
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81779.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_108_365G1_scaffold_199_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25078..25566
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridium RepID=B6FPM9_9CLOT
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EEA81988.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AsnC family transcriptional regulator
L3_108_365G1_scaffold_199_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25566..26741
DNA (1176bp) protein (392aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89842.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Aspartate/tyrosine/aromatic aminotransferase
L3_108_365G1_scaffold_199_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26781..27278
DNA (498bp) protein (166aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WAQ6_9FIRM
L3_108_365G1_scaffold_199_28
unknown

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27359..27580
DNA (222bp) protein (74aa)

This feature has no annotations

L3_108_365G1_scaffold_199_29
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28441..28785
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5B0_BLAHA
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49968.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L3_108_365G1_scaffold_199_30
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28816..30834
DNA (2019bp) protein (673aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C2J3_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Displaying items 1-30 of 159 in total

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