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L3_108_365G1_scaffold_243

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_243_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

375..1244
DNA (870bp) protein (290aa)
23S rRNA (-C5)-methyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK3_9FIRM
23S rRNA (-C5)-methyltransferase {ECO:0000313|EMBL:EGN47990.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1241..2179)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47991.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2327..2785)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47992.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative secreted protein
L3_108_365G1_scaffold_243_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2776..3117)
DNA (342bp) protein (114aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK6_9FIRM
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:EGN47993.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hydrogenase nickel incorporation protein HypA
L3_108_365G1_scaffold_243_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3124..3792)
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK7_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EGN47994.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hydrogenase nickel incorporation protein HypB
L3_108_365G1_scaffold_243_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4015..5187)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47995.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Protein of unknown function (DUF3048).
L3_108_365G1_scaffold_243_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5345..6073)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47996.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6122..6574)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47996.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6558..7445)
DNA (888bp) protein (296aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN47997.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type multidrug transport system, ATPase component
L3_108_365G1_scaffold_243_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7436..8206)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47998.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8203..8724)
DNA (522bp) protein (174aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL2_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGN47999.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_108_365G1_scaffold_243_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8972..10165)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL4_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_365G1_scaffold_243_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10262..12379)
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL5_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
elongation factor G
L3_108_365G1_scaffold_243_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12440..12910)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL6_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
30S ribosomal protein S7
L3_108_365G1_scaffold_243_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13097..13516)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=2 Tax=Clostridiales RepID=F7KKL7_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
SSU ribosomal protein S12P
L3_108_365G1_scaffold_243_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13687..14136)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48005.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_365G1_scaffold_243_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14230..16125)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LJQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05183.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative signaling protein
L3_108_365G1_scaffold_243_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16125..17558)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48008.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyltransferase
L3_108_365G1_scaffold_243_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17551..18696)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48009.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18713..20878)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48010.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20895..22343)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48011.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22348..23025)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48012.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
membrane protein
L3_108_365G1_scaffold_243_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23060..23755)
DNA (696bp) protein (232aa)
VTC domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAY4_9CLOT
VTC domain protein {ECO:0000313|EMBL:ERI69360.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
FIG01116623: hypothetical protein
L3_108_365G1_scaffold_243_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23771..24649)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48014.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24939..28664)
DNA (3726bp) protein (1242aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
rpoC; DNA directed RNA polymerase beta-prime subunit RpoC (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM8_9FIRM
L3_108_365G1_scaffold_243_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28683..32471)
DNA (3789bp) protein (1263aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
rpoB; DNA directed RNA polymerase beta subunit RpoB (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKM9_9FIRM
L3_108_365G1_scaffold_243_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32939..33316)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKN0_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
LSU ribosomal protein L12P
L3_108_365G1_scaffold_243_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33367..33927)
DNA (561bp) protein (187aa)
50S ribosomal protein L10 n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKN1_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_108_365G1_scaffold_243_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34256..36163)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48019.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_108_365G1_scaffold_243_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36236..37372)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48020.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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