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L3_108_365G1_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_265_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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1..702
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQ99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26992.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_265_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

699..1178
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26993.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
collagen triple helix repeat-containing protein
L3_108_365G1_scaffold_265_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1315..1824
DNA (510bp) protein (170aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2CCH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32555.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cysteine ABC transporter permease/ATP-binding protein CydD
L3_108_365G1_scaffold_265_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(1774..3156)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26994.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative efflux protein, MATE family
L3_108_365G1_scaffold_265_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(3487..4542)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27876.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Phage integrase family.
L3_108_365G1_scaffold_265_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(4677..5309)
DNA (633bp) protein (211aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MGK1_9FIRM
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CDB95114.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
L3_108_365G1_scaffold_265_7
unknown

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5474..5719
DNA (246bp) protein (82aa)

This feature has no annotations

L3_108_365G1_scaffold_265_8
unknown

Not on your lists

5840..6091
DNA (252bp) protein (84aa)

This feature has no annotations

L3_108_365G1_scaffold_265_9
unknown

Not on your lists

6110..6277
DNA (168bp) protein (56aa)

This feature has no annotations

L3_108_365G1_scaffold_265_10
unknown

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6413..6808
DNA (396bp) protein (132aa)

This feature has no annotations

L3_108_365G1_scaffold_265_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6941..7309
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46605.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_108_365G1_scaffold_265_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7324..8058
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SB93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21779.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_108_365G1_scaffold_265_13
unknown

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8168..8374
DNA (207bp) protein (69aa)

This feature has no annotations

L3_108_365G1_scaffold_265_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8375..9328
DNA (954bp) protein (318aa)
YqaJ viral recombinase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTD1_9CLOT
YqaJ viral recombinase family protein {ECO:0000313|EMBL:EDO61427.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
endonuclease
L3_108_365G1_scaffold_265_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9315..10895
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FIN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00637.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_108_365G1_scaffold_265_16
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10910..11827
DNA (918bp) protein (306aa)
Phage RecT family recombinase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K5P1_9FIRM
Phage RecT family recombinase {ECO:0000313|EMBL:EHR38759.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
putative recombinase
L3_108_365G1_scaffold_265_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11928..12350
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN40_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ssb; single-stranded DNA-binding protein
L3_108_365G1_scaffold_265_18
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12515..13348
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPA2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:CCC16551.1}; TaxID=1042160 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus pentosus IG1.;"
hypothetical protein
L3_108_365G1_scaffold_265_19
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13360..14199
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WX70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11514.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_108_365G1_scaffold_265_20
unknown

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14572..14739
DNA (168bp) protein (56aa)

This feature has no annotations

L3_108_365G1_scaffold_265_21
unknown

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14896..15051
DNA (156bp) protein (52aa)

This feature has no annotations

L3_108_365G1_scaffold_265_22
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15053..15640
DNA (588bp) protein (196aa)
deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054741}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054755};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Deoxycytidine triphosphate deaminase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y205_CLOSH
L3_108_365G1_scaffold_265_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15719..16021
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3X8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39543.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_108_365G1_scaffold_265_24
unknown

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16475..16663
DNA (189bp) protein (63aa)

This feature has no annotations

L3_108_365G1_scaffold_265_25
unknown

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16656..16874
DNA (219bp) protein (73aa)

This feature has no annotations

L3_108_365G1_scaffold_265_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16858..17205
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF52300.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_108_365G1_scaffold_265_27
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17202..17525
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U9JUX7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKG36072.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
L3_108_365G1_scaffold_265_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17525..17821
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YN31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53658.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_108_365G1_scaffold_265_29
unknown

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17821..18132
DNA (312bp) protein (104aa)

This feature has no annotations

L3_108_365G1_scaffold_265_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18129..18566
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11212.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Displaying items 1-30 of 100 in total

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