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L3_108_365G1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_289_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..1163
DNA (1161bp) protein (387aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY8_9FIRM
L3_108_365G1_scaffold_289_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1566..2138
DNA (573bp) protein (191aa)
Rubrerythrin n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY3_9FIRM
Rubrerythrin {ECO:0000313|EMBL:EDS10669.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rbr; rubrerythrin
L3_108_365G1_scaffold_289_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2199..2855)
DNA (657bp) protein (219aa)
Nucleotidyltransferase domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY2_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EDS10668.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_289_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3176..3670)
DNA (495bp) protein (165aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Shikimate kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY0_9FIRM
hypothetical protein
L3_108_365G1_scaffold_289_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3667..4515)
DNA (849bp) protein (283aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX9_9FIRM
L3_108_365G1_scaffold_289_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4595..5512)
DNA (918bp) protein (306aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX8_9FIRM
L3_108_365G1_scaffold_289_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5724..6716
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX6_9FIRM
L3_108_365G1_scaffold_289_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7003..7959
DNA (957bp) protein (319aa)
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EDS10660.1}; EC=1.3.-.- {ECO:0000313|EMBL:EDS10660.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX4_9FIRM
L3_108_365G1_scaffold_289_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7967..8683
DNA (717bp) protein (239aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDS10659.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDS10659.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX3_9FIRM
L3_108_365G1_scaffold_289_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8929..10164
DNA (1236bp) protein (412aa)
Beta-ketoacyl-acyl-carrier-protein synthase II {ECO:0000313|EMBL:EDS10658.1}; EC=2.3.1.179 {ECO:0000313|EMBL:EDS10658.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Beta-ketoacyl-acyl-carrier-protein synthase II n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX2_9FIRM
3-oxoacyl-(acyl-carrier-protein) synthase 2
L3_108_365G1_scaffold_289_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10204..10635
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCX1_9FIRM
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
L3_108_365G1_scaffold_289_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10841..11068
DNA (228bp) protein (76aa)
Acyl carrier protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW9_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
acpP; Acyl carrier protein
L3_108_365G1_scaffold_289_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11234..11941
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10654.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Integral membrane protein, interacts with FtsH
L3_108_365G1_scaffold_289_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11973..13409
DNA (1437bp) protein (479aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
proS; Prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW7_9FIRM
L3_108_365G1_scaffold_289_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13646..14221
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10652.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_108_365G1_scaffold_289_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14679..14990
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW3_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_289_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15077..15709
DNA (633bp) protein (211aa)
50S ribosomal protein L3 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW2_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LSU ribosomal protein L3P
L3_108_365G1_scaffold_289_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15729..16352
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW1_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LSU ribosomal protein L4P
L3_108_365G1_scaffold_289_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16352..16648
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCW0_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LSU ribosomal protein L23P
L3_108_365G1_scaffold_289_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16747..17580
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV9_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rplB; ribosomal protein L2
L3_108_365G1_scaffold_289_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17608..17883
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV8_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
SSU ribosomal protein S19P
L3_108_365G1_scaffold_289_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17911..18246
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV7_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LSU ribosomal protein L22P
L3_108_365G1_scaffold_289_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18268..18957
DNA (690bp) protein (230aa)
30S ribosomal protein S3 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV6_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rpsC; 30S ribosomal protein S3
L3_108_365G1_scaffold_289_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18957..19388
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV5_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LSU ribosomal protein L16P
L3_108_365G1_scaffold_289_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19388..19588
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV4_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_108_365G1_scaffold_289_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19610..19867
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV3_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
30S ribosomal protein S17
L3_108_365G1_scaffold_289_27
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19901..20269
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LB79_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
LSU ribosomal protein L14P
L3_108_365G1_scaffold_289_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20286..20609
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV1_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rplX; ribosomal protein L24
L3_108_365G1_scaffold_289_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20626..21165
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCV0_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Ribosomal protein L5
L3_108_365G1_scaffold_289_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21193..21363
DNA (171bp) protein (57aa)
30S ribosomal protein S14 type Z n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCU9_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
30S ribosomal protein S14
Displaying items 1-30 of 90 in total

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