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L3_108_365G1_scaffold_334

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_365G1_scaffold_334_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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1..900
DNA (900bp) protein (300aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJ65_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY28139.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative efflux protein, MATE family
L3_108_365G1_scaffold_334_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(989..1822)
DNA (834bp) protein (278aa)
rrmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUF6_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CCY28141.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_334_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(1855..2904)
DNA (1050bp) protein (350aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJ70_9FIRM
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:CCY28144.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Tdh; threonine dehydrogenase
L3_108_365G1_scaffold_334_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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3153..5228
DNA (2076bp) protein (692aa)
FHA domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTL7_9FIRM
FHA domain protein {ECO:0000313|EMBL:CCY28147.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5225..6556
DNA (1332bp) protein (444aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ42_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDB27523.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative penicillin-binding protein A
L3_108_365G1_scaffold_334_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(6573..7097)
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUH3_9FIRM
L3_108_365G1_scaffold_334_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7152..7436)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28162.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7509..8315)
DNA (807bp) protein (269aa)
Putative nitrilase family member 2 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJ89_9FIRM
Putative nitrilase family member 2 {ECO:0000313|EMBL:CCY28164.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_108_365G1_scaffold_334_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(8395..8637)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUH6_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rpsR; 30S ribosomal protein S18
L3_108_365G1_scaffold_334_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(8701..9192)
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF76_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ssb; single-stranded DNA-binding protein
L3_108_365G1_scaffold_334_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(9206..9502)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEL7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rpsF; 30S ribosomal protein S6
L3_108_365G1_scaffold_334_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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9713..10165
DNA (453bp) protein (151aa)
Stage V sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUI1_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CCY28171.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
stage V sporulation protein AC
L3_108_365G1_scaffold_334_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(10301..10879)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28172.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

10986..11873
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28173.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
LysR family transcriptional regulator
L3_108_365G1_scaffold_334_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(12013..12324)
DNA (312bp) protein (104aa)
UPF0145 protein BN469_00375 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEM1_9FIRM
UPF0145 protein BN469_00375 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(12305..12541)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28177.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_334_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(12563..12775)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28179.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(12786..13799)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28182.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_108_365G1_scaffold_334_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(13893..14183)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28183.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_334_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

14295..14525
DNA (231bp) protein (77aa)
Transcriptional regulator XRE family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJA9_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCY28184.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcriptional regulator, XRE family
L3_108_365G1_scaffold_334_21
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

14686..15477
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28186.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
EDD domain protein, DegV family
L3_108_365G1_scaffold_334_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

15604..16740
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28187.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_334_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

16998..18143
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28189.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_365G1_scaffold_334_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18264..18995
DNA (732bp) protein (244aa)
ABC transporter family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEN4_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:CCY28190.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ABC transporter
L3_108_365G1_scaffold_334_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

19006..19758
DNA (753bp) protein (251aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTQ8_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY28192.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

19800..20954
DNA (1155bp) protein (385aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Sensor histidine kinase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJB9_9FIRM
sensor histidine kinase
L3_108_365G1_scaffold_334_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

20954..21646
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28196.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_365G1_scaffold_334_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(21778..22281)
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTR1_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcription elongation factor GreA
L3_108_365G1_scaffold_334_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(22382..23263)
DNA (882bp) protein (294aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF96_9FIRM
DegV family protein {ECO:0000313|EMBL:CCY28198.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
degV family protein
L3_108_365G1_scaffold_334_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(23430..23921)
DNA (492bp) protein (164aa)
Flavodoxin n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJC4_9FIRM
Flavodoxin {ECO:0000313|EMBL:CCY28199.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
flavodoxin
Displaying items 1-30 of 74 in total

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